Gene: zgc:174919 - ENSDARG00000071725 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000071725
Name	zgc:174919
Description	zgc:174919 [Source:ZFIN;Acc:ZDB-GENE-080220-12]
Organism	Danio rerio (zebrafish)

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	3.30e3 3.30e3	88.97 88.97	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	4.84e3 4.84e3	83.79 83.79	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	7.51e3 7.51e3	74.87 74.87	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	7.82e3 7.82e3	73.81 73.81	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000011Blastula:1k-cell ZFS:0000015Blastula:Dome	8.58e3 8.58e3 1.02e4	71.28 71.28 65.74	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	8.81e3 8.81e3	70.50 70.50	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	9.06e3 9.06e3	69.67 69.67	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	9.70e3 9.70e3 1.12e4	67.54 67.54 62.43	AEIR AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.00e4 1.00e4	66.50 66.50	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.13e4 1.13e4	62.19 62.19	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.16e4 1.16e4	61.30 61.30	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.19e4 1.19e4	60.15 60.15	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	1.23e4 1.23e4 1.72e4	58.98 58.98 42.37	AEIR AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.27e4 1.27e4	57.47 57.47	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.27e4 1.27e4	57.38 57.38	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.28e4 1.28e4	57.18 57.18	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.28e4 1.28e4	57.03 57.03	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.32e4 1.32e4	55.89 55.89	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.32e4 1.32e4	55.77 55.77	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages UBERON:0000068embryo stage UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5	1.37e4 1.37e4 1.48e4 1.51e4 1.75e4 1.77e4	54.14 54.14 50.44 49.31 41.38 40.83	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.37e4 1.37e4	54.10 54.10	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.39e4 1.39e4	53.44 53.44	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	1.46e4 1.46e4 1.56e4	51.00 51.00 47.85	AEIR AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	1.49e4 1.49e4 1.50e4	50.13 50.13 49.67	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

Ensembl	ENSDARG00000071725 (zgc:174919)
ZFIN	ZDB-GENE-080220-12 (zgc:174919)
EMBL	BX324210
Uniprot/SPTREMBL	F1QQW8, F1QQW8_DANRE