D. rerio Gene: si:dkey-37o8.1 - ENSDARG00000071727 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000071727
Namesi:dkey-37o8.1
Descriptionsi:dkey-37o8.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5667]
OrganismDanio rerio (zebrafish)
Synonym(s)fi12b10, wu:fi12b10
Orthologs(s)1 orthologs
Paralog(s)7 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
251
  • 251
  • 9.68e3
99.16
  • 99.16
  • 67.58
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
572
  • 572
98.09
  • 98.09
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
694
  • 694
97.68
  • 97.68
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.14e3
  • 1.14e3
96.20
  • 96.20
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.34e3
  • 1.34e3
95.51
  • 95.51
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.01e3
  • 3.01e3
89.93
  • 89.93
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
5.46e3
  • 5.46e3
81.71
  • 81.71
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.90e3
  • 5.90e3
80.25
  • 80.25
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.00e3
  • 6.00e3
79.90
  • 79.90
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.50e3
  • 7.50e3
74.89
  • 74.89
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000066fully formed stage
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000104life cycle
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.01e4
  • 1.01e4
  • 1.02e4
  • 1.15e4
  • 1.16e4
  • 1.28e4
  • 1.30e4
  • 1.50e4
  • 1.59e4
  • 1.60e4
  • 1.64e4
  • 1.70e4
66.10
  • 66.10
  • 65.78
  • 61.42
  • 61.31
  • 57.23
  • 56.36
  • 49.92
  • 46.86
  • 46.33
  • 45.17
  • 43.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.03e4
  • 1.03e4
65.64
  • 65.64
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.03e4
  • 1.03e4
65.35
  • 65.35
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
1.05e4
  • 1.05e4
  • 1.06e4
  • 1.25e4
  • 1.26e4
  • 1.57e4
64.70
  • 64.70
  • 64.54
  • 58.04
  • 57.83
  • 47.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
1.10e4
  • 1.10e4
  • 1.34e4
  • 1.34e4
  • 1.41e4
  • 1.72e4
  • 1.72e4
63.18
  • 63.18
  • 55.19
  • 55.05
  • 52.88
  • 42.56
  • 42.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
  • 1.44e4
58.59
  • 58.59
  • 51.84
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.16
  • 49.16
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
  • 2.22e4
49.11
  • 49.11
  • 25.65
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
47.95
  • 47.95
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.72
  • 43.72
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
  • 2.07e4
40.03
  • 40.03
  • 30.57
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.97e4
  • 1.97e4
  • 2.06e4
34.16
  • 34.16
  • 31.10
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.70
  • 32.70
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
2.01e4
  • 2.01e4
  • 2.20e4
  • 2.31e4
  • 2.42e4
  • 2.77e4
32.69
  • 32.69
  • 26.18
  • 22.56
  • 19.06
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.15e4
  • 2.15e4
27.88
  • 27.88
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
27.02
  • 27.02
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.39
  • 26.39
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000071727.

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000071727.

Cross-references

EnsemblENSDARG00000071727 (si:dkey-37o8.1)
ZFINZDB-GENE-030131-5667 (si:dkey-37o8.1)
EMBLAL840641
Uniprot/SPTREMBLF1QQW9, F1QQW9_DANRE

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