D. rerio Gene: frmd8 - ENSDARG00000073696 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000073696
Namefrmd8
DescriptionFERM domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-090812-5]
OrganismDanio rerio (zebrafish)
Synonym(s)zfbili
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.91e3
  • 1.91e3
93.62
  • 93.62
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.84e3
  • 2.84e3
90.48
  • 90.48
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.27e3
  • 3.27e3
89.07
  • 89.07
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
3.38e3
  • 3.38e3
  • 4.11e3
  • 5.33e3
  • 5.74e3
  • 7.44e3
88.69
  • 88.69
  • 86.23
  • 82.17
  • 80.80
  • 75.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
3.42e3
  • 3.42e3
  • 3.43e3
  • 4.14e3
  • 4.69e3
  • 4.99e3
  • 6.47e3
88.54
  • 88.54
  • 88.52
  • 86.13
  • 84.29
  • 83.28
  • 78.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.56e3
  • 3.56e3
  • 4.19e3
88.08
  • 88.08
  • 85.99
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.57e3
  • 3.57e3
88.06
  • 88.06
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.61e3
  • 3.61e3
87.91
  • 87.91
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
3.73e3
  • 3.73e3
  • 4.26e3
  • 4.44e3
  • 4.81e3
  • 4.83e3
  • 4.90e3
  • 4.95e3
  • 4.97e3
  • 5.36e3
  • 5.42e3
  • 5.75e3
  • 5.79e3
  • 5.97e3
  • 6.10e3
  • 7.91e3
  • 8.96e3
87.52
  • 87.52
  • 85.74
  • 85.14
  • 83.90
  • 83.83
  • 83.58
  • 83.43
  • 83.35
  • 82.05
  • 81.85
  • 80.74
  • 80.61
  • 80.03
  • 79.58
  • 73.52
  • 69.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.99e3
  • 3.99e3
86.65
  • 86.65
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.12e3
  • 4.12e3
86.20
  • 86.20
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.12e3
  • 4.12e3
86.19
  • 86.19
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.30e3
  • 4.30e3
85.60
  • 85.60
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
4.35e3
  • 4.35e3
  • 5.42e3
  • 5.79e3
  • 5.96e3
  • 6.14e3
  • 6.19e3
  • 6.67e3
  • 6.72e3
  • 6.74e3
  • 6.80e3
85.44
  • 85.44
  • 81.86
  • 80.63
  • 80.03
  • 79.43
  • 79.29
  • 77.68
  • 77.48
  • 77.42
  • 77.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.44e3
  • 4.44e3
  • 7.93e3
85.12
  • 85.12
  • 73.46
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.57e3
  • 4.57e3
84.71
  • 84.71
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
4.57e3
  • 4.57e3
  • 5.19e3
  • 5.38e3
84.69
  • 84.69
  • 82.62
  • 81.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
4.65e3
  • 4.65e3
  • 6.51e3
84.43
  • 84.43
  • 78.20
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.68e3
  • 4.68e3
84.35
  • 84.35
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.07e3
  • 5.07e3
83.03
  • 83.03
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.27e3
  • 5.27e3
  • 6.08e3
  • 7.91e3
  • 9.62e3
82.35
  • 82.35
  • 79.65
  • 73.52
  • 67.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.47e3
  • 5.47e3
81.69
  • 81.69
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.56e3
  • 5.56e3
81.37
  • 81.37
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.71e3
  • 5.71e3
80.89
  • 80.89
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.80e3
  • 5.80e3
80.60
  • 80.60
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.09e3
  • 6.09e3
  • 7.30e3
79.63
  • 79.63
  • 75.55
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.37e3
  • 6.37e3
78.68
  • 78.68
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.57e3
  • 6.57e3
78.01
  • 78.01
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.89e3
  • 6.89e3
76.95
  • 76.95
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.43e3
  • 7.43e3
75.13
  • 75.13
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.68e3
  • 7.68e3
74.28
  • 74.28
AEIR
  • AEIR
UBERON:0007812post-anal tail
  • ZFS:0000031Pharyngula:Prim-25
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000029Pharyngula:Prim-5
1.35e4
  • 1.35e4
54.96
  • 54.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000073696 (frmd8)
ZFINZDB-GENE-090812-5 (frmd8)
EMBLCR450793
Uniprot/SPTREMBLE7F221, E7F221_DANRE

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