D. rerio Gene: rbfa - ENSDARG00000073705 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000073705
Namerbfa
Descriptionribosome binding factor A [Source:ZFIN;Acc:ZDB-GENE-070410-83]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:162590

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.34e3
  • 1.34e3
95.53
  • 95.53
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.55e3
  • 1.55e3
94.80
  • 94.80
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
2.22e3
  • 2.22e3
  • 3.66e3
  • 5.21e3
  • 5.26e3
  • 8.93e3
92.58
  • 92.58
  • 87.75
  • 82.56
  • 82.38
  • 70.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.66e3
  • 3.66e3
87.74
  • 87.74
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.41e3
  • 4.41e3
85.24
  • 85.24
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.52e3
  • 4.52e3
84.86
  • 84.86
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.84e3
  • 4.84e3
83.80
  • 83.80
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.20e3
  • 5.20e3
82.60
  • 82.60
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.99e3
  • 5.99e3
79.94
  • 79.94
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.83e3
  • 6.83e3
77.14
  • 77.14
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.04e3
  • 7.04e3
76.44
  • 76.44
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.18e3
  • 7.18e3
75.98
  • 75.98
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
7.56e3
  • 7.56e3
  • 9.23e3
  • 1.01e4
  • 1.13e4
  • 1.15e4
  • 1.27e4
74.70
  • 74.70
  • 69.09
  • 66.18
  • 62.32
  • 61.41
  • 57.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.76e3
  • 7.76e3
74.03
  • 74.03
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.26e3
  • 8.26e3
  • 8.40e3
72.36
  • 72.36
  • 71.87
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.50e3
  • 8.50e3
  • 1.23e4
71.54
  • 71.54
  • 58.72
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.69e3
  • 8.69e3
  • 1.60e4
70.90
  • 70.90
  • 46.50
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.80e3
  • 8.80e3
70.53
  • 70.53
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.90e3
  • 8.90e3
70.20
  • 70.20
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
9.35e3
  • 9.35e3
  • 1.10e4
  • 1.13e4
  • 1.15e4
  • 1.19e4
  • 1.25e4
  • 1.29e4
  • 1.31e4
  • 1.33e4
  • 1.35e4
68.71
  • 68.71
  • 63.03
  • 62.03
  • 61.52
  • 59.99
  • 58.30
  • 56.92
  • 56.04
  • 55.36
  • 54.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
9.38e3
  • 9.38e3
  • 9.98e3
  • 1.03e4
  • 1.18e4
68.59
  • 68.59
  • 66.57
  • 65.50
  • 60.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.52e3
  • 9.52e3
68.11
  • 68.11
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
9.96e3
  • 9.96e3
  • 1.30e4
  • 1.34e4
  • 1.34e4
  • 1.36e4
  • 1.36e4
  • 1.43e4
  • 1.45e4
  • 1.47e4
  • 1.49e4
  • 1.49e4
  • 1.52e4
  • 1.56e4
  • 1.57e4
  • 1.58e4
  • 1.59e4
66.64
  • 66.64
  • 56.56
  • 55.19
  • 55.05
  • 54.55
  • 54.31
  • 52.26
  • 51.60
  • 50.76
  • 50.25
  • 50.20
  • 49.23
  • 47.61
  • 47.46
  • 47.09
  • 46.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.38
  • 66.38
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.00e4
  • 1.00e4
66.38
  • 66.38
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.84
  • 64.84
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.08e4
  • 1.08e4
63.69
  • 63.69
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.18
  • 63.18
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.14
  • 63.14
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.11e4
  • 1.11e4
62.87
  • 62.87
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.14e4
  • 1.14e4
61.76
  • 61.76
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.27e4
  • 1.27e4
  • 1.29e4
  • 1.64e4
57.60
  • 57.60
  • 56.86
  • 45.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.33e4
  • 1.33e4
  • 1.41e4
55.33
  • 55.33
  • 52.64
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EnsemblENSDARG00000073705 (rbfa)
ZFINZDB-GENE-070410-83 (rbfa)
EMBLCR391941
Uniprot/SPTREMBLF1QXS7, F1QXS7_DANRE

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