D. rerio Gene: magi2b - ENSDARG00000073769 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000073769
Namemagi2b
Descriptionmembrane associated guanylate kinase, WW and PDZ domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-141211-6]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-127m7.3
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.86e3
  • 8.86e3
70.35
  • 70.35
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.92e3
  • 8.92e3
70.15
  • 70.15
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.20e4
  • 1.20e4
  • 1.23e4
59.66
  • 59.66
  • 58.82
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.27e4
  • 1.27e4
57.44
  • 57.44
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
  • 1.86e4
52.98
  • 52.98
  • 37.79
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.45e4
  • 1.45e4
  • 1.47e4
51.48
  • 51.48
  • 50.91
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.50e4
  • 1.50e4
  • 1.80e4
  • 1.91e4
  • 1.93e4
  • 2.19e4
49.63
  • 49.63
  • 39.78
  • 36.14
  • 35.52
  • 26.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.22
  • 38.22
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
  • 2.22e4
37.16
  • 37.16
  • 25.62
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.13
  • 37.13
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.56
  • 34.56
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.00e4
  • 2.00e4
  • 2.11e4
33.15
  • 33.15
  • 29.20
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.34
  • 32.34
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.48
  • 25.48
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
24.91
  • 24.91
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.26e4
  • 2.26e4
24.23
  • 24.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression
Eumetazoa5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000073769.

Cross-references

EnsemblENSDARG00000073769 (magi2b)
ZFINZDB-GENE-141211-6 (magi2b)
EMBLAL953857, BX546452, CU928041, CU929454
Uniprot/SPTREMBLA0A0G2KGQ6, A0A0G2KGQ6_DANRE, E7FH65, E7FH65_DANRE

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