We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

D. rerio Gene: thbs2b - ENSDARG00000073810 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000073810
Namethbs2b
Descriptionthrombospondin 2b [Source:ZFIN;Acc:ZDB-GENE-100623-1]
OrganismDanio rerio (zebrafish)
Synonym(s)f8w605
Orthologs(s)17 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.62e3
  • 2.62e3
91.23
  • 91.23
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.12e3
  • 3.12e3
89.56
  • 89.56
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.01e3
  • 4.01e3
86.58
  • 86.58
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.16e3
  • 4.16e3
86.07
  • 86.07
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.72e3
  • 4.72e3
84.19
  • 84.19
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
5.24e3
  • 5.24e3
82.47
  • 82.47
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
8.59e3
  • 8.59e3
  • 9.41e3
  • 1.33e4
  • 1.46e4
  • 1.72e4
71.24
  • 71.24
  • 68.50
  • 55.33
  • 51.23
  • 42.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.96e3
  • 9.96e3
  • 1.61e4
66.64
  • 66.64
  • 46.14
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.72
  • 64.72
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.17e4
  • 1.17e4
  • 1.53e4
60.75
  • 60.75
  • 48.65
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.37e4
  • 1.37e4
54.07
  • 54.07
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.47
  • 52.47
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.34
  • 43.34
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.72e4
  • 1.72e4
42.32
  • 42.32
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.85
  • 39.85
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
27.09
  • 27.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000073810.

Cross-references

EnsemblENSDARG00000073810 (thbs2b)
ZFINZDB-GENE-100623-1 (thbs2b)
EMBLCR381684
Uniprot/SPTREMBLE7F1S4, E7F1S4_DANRE

Do not show this banner again