D. rerio Gene: zgc:113397 - ENSDARG00000073821 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000073821
Namezgc:113397
Descriptionzgc:113397 [Source:ZFIN;Acc:ZDB-GENE-050913-13]
OrganismDanio rerio (zebrafish)
Paralog(s)365 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.49
  • 55.49
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.70
  • 54.70
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.06
  • 54.06
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.42e4
  • 1.42e4
  • 1.44e4
52.34
  • 52.34
  • 51.74
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.44e4
  • 1.44e4
51.64
  • 51.64
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.49e4
  • 1.49e4
  • 1.50e4
50.26
  • 50.26
  • 49.78
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.39
  • 49.39
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
48.98
  • 48.98
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.59
  • 48.59
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.89
  • 46.89
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
  • 1.71e4
46.71
  • 46.71
  • 42.61
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
  • 2.22e4
43.76
  • 43.76
  • 25.72
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.68e4
  • 1.68e4
  • 1.70e4
  • 1.82e4
  • 1.90e4
  • 2.16e4
43.70
  • 43.70
  • 43.03
  • 39.05
  • 36.29
  • 27.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.28
  • 41.28
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.76
  • 39.76
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.45
  • 38.45
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.47
  • 35.47
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.08e4
  • 2.08e4
  • 2.29e4
30.50
  • 30.50
  • 23.38
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.14e4
  • 2.14e4
28.31
  • 28.31
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.19e4
  • 2.19e4
26.61
  • 26.61
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
23.62
  • 23.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi365 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000073821.

Cross-references

EnsemblENSDARG00000073821 (zgc:113397)
ZFINZDB-GENE-050913-13 (zgc:113397)
EMBLCU856622
Uniprot/SPTREMBLE7FB80, E7FB80_DANRE

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