D. rerio Gene: RASGRF1 - ENSDARG00000073824 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000073824
NameRASGRF1
Descriptionsi:ch211-234p18.3 [Source:ZFIN;Acc:ZDB-GENE-090311-28]
OrganismDanio rerio (zebrafish)
Synonym(s)cdc25, cdc25l, gnrp, grf1, grf55, h-grf55, pp13187, rasgrf1
Orthologs(s)16 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.87e3
  • 1.87e3
93.74
  • 93.74
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.30e3
  • 3.30e3
88.95
  • 88.95
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.25e3
  • 6.25e3
  • 7.67e3
79.08
  • 79.08
  • 74.33
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
7.24e3
  • 7.24e3
  • 1.67e4
  • 1.70e4
  • 1.70e4
  • 1.71e4
75.77
  • 75.77
  • 43.99
  • 43.22
  • 42.97
  • 42.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.03e4
  • 1.03e4
  • 1.65e4
65.55
  • 65.55
  • 44.70
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.53
  • 39.53
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.82e4
  • 1.82e4
39.21
  • 39.21
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.53
  • 35.53
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.65
  • 30.65
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Eumetazoa3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000073824.

Cross-references

EnsemblENSDARG00000073824 (RASGRF1)
HGNCHGNC:9875 (RASGRF1)
ZFINZDB-GENE-090311-28 (si:ch211-234p18.3)
EMBLCR352253, CR450750
Uniprot/SPTREMBLE7F7V2, E7F7V2_DANRE

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