D. rerio Gene: hdac7b - ENSDARG00000073850 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000073850
Namehdac7b
Descriptionhistone deacetylase 7b [Source:ZFIN;Acc:ZDB-GENE-131127-113]
OrganismDanio rerio (zebrafish)
Synonym(s)hdac7, si:ch211-4c18.2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.46e3
  • 6.46e3
78.37
  • 78.37
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.81e3
  • 6.81e3
77.19
  • 77.19
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.82e3
  • 7.82e3
  • 1.51e4
73.81
  • 73.81
  • 49.33
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.38e3
  • 9.38e3
68.61
  • 68.61
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.99e3
  • 9.99e3
66.54
  • 66.54
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.68
  • 63.68
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.65
  • 63.65
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.59
  • 63.59
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.53
  • 60.53
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.29e4
  • 1.29e4
  • 1.36e4
56.81
  • 56.81
  • 54.37
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.83
  • 55.83
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.33e4
  • 1.33e4
55.47
  • 55.47
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.38e4
  • 1.38e4
53.86
  • 53.86
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.00
  • 52.00
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.14
  • 50.14
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.08
  • 50.08
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.53e4
  • 1.53e4
48.63
  • 48.63
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
1.65e4
  • 1.65e4
  • 2.04e4
  • 2.14e4
  • 2.19e4
  • 2.20e4
44.84
  • 44.84
  • 31.66
  • 28.35
  • 26.77
  • 26.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.62
  • 44.62
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.62
  • 44.62
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.82e4
  • 1.82e4
  • 2.19e4
39.10
  • 39.10
  • 26.60
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.88e4
  • 1.88e4
  • 2.16e4
37.19
  • 37.19
  • 27.73
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.68
  • 36.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000073850 (hdac7b)
ZFINZDB-GENE-131127-113 (hdac7b)
EMBLCR847949
Uniprot/SPTREMBLE7FAL6, E7FAL6_DANRE

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