D. rerio Gene: slc41a2b - ENSDARG00000073881 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000073881
Nameslc41a2b
Descriptionsolute carrier family 41 (magnesium transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-100427-2]
OrganismDanio rerio (zebrafish)
Synonym(s)slc41a2
Orthologs(s)21 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.83e3
  • 2.83e3
90.52
  • 90.52
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.91e3
  • 3.91e3
86.92
  • 86.92
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.30e3
  • 5.30e3
82.27
  • 82.27
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.27e3
  • 6.27e3
79.00
  • 79.00
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.51e3
  • 6.51e3
78.21
  • 78.21
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.79e3
  • 6.79e3
77.28
  • 77.28
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.19e3
  • 8.19e3
72.58
  • 72.58
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.19e3
  • 8.19e3
  • 8.88e3
72.56
  • 72.56
  • 70.28
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.56e3
  • 8.56e3
71.35
  • 71.35
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.58e3
  • 8.58e3
71.28
  • 71.28
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
8.85e3
  • 8.85e3
  • 9.66e3
  • 1.04e4
  • 1.21e4
  • 1.31e4
70.38
  • 70.38
  • 67.65
  • 65.23
  • 59.45
  • 56.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.35e3
  • 9.35e3
68.71
  • 68.71
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
9.52e3
  • 9.52e3
  • 1.12e4
68.14
  • 68.14
  • 62.44
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.01e4
  • 1.01e4
  • 1.01e4
66.09
  • 66.09
  • 66.09
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.05
  • 66.05
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.38
  • 65.38
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.05e4
  • 1.05e4
  • 1.39e4
64.75
  • 64.75
  • 53.40
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.21
  • 63.21
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.51
  • 61.51
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.19e4
  • 1.19e4
  • 1.25e4
60.24
  • 60.24
  • 58.16
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.21e4
  • 1.21e4
59.56
  • 59.56
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.77
  • 57.77
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.26e4
  • 1.26e4
57.66
  • 57.66
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.94
  • 56.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species20 genesCompare expression
Bilateria20 species21 genesCompare expression

Orthology information comes from OMA : ENSDARG00000073881.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Metazoa2 genesCompare expression
Opisthokonta3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000073881.

Cross-references

EnsemblENSDARG00000073881 (slc41a2b)
ZFINZDB-GENE-100427-2 (slc41a2b)
EMBLCT573393
Uniprot/SPTREMBLE7F597, E7F597_DANRE

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