D. rerio Gene: VWA5A (1 to many) - ENSDARG00000073905 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000073905
NameVWA5A (1 to many)
Descriptionzgc:92481 [Source:ZFIN;Acc:ZDB-GENE-040912-181]
OrganismDanio rerio (zebrafish)
Synonym(s)bcsc-1, loh11cr2a, wu:fb17g06
Orthologs(s)26 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
783
  • 783
97.38
  • 97.38
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
906
  • 906
96.97
  • 96.97
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
968
  • 968
96.76
  • 96.76
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
1.59e3
  • 1.59e3
  • 1.76e3
  • 2.57e3
  • 4.47e3
  • 7.34e3
  • 7.72e3
  • 8.77e3
  • 9.28e3
  • 1.02e4
  • 1.18e4
94.68
  • 94.68
  • 94.11
  • 91.40
  • 85.03
  • 75.42
  • 74.15
  • 70.64
  • 68.92
  • 65.94
  • 60.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.91e3
  • 1.91e3
  • 1.03e4
93.62
  • 93.62
  • 65.48
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.04e3
  • 2.04e3
93.16
  • 93.16
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.31e3
  • 2.31e3
92.28
  • 92.28
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.35e3
  • 2.35e3
92.12
  • 92.12
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.42e3
  • 2.42e3
91.91
  • 91.91
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
2.74e3
  • 2.74e3
  • 2.93e3
90.82
  • 90.82
  • 90.18
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.06e3
  • 3.06e3
89.74
  • 89.74
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.22e3
  • 3.22e3
89.21
  • 89.21
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.24e3
  • 3.24e3
  • 4.74e3
89.17
  • 89.17
  • 84.12
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.42e3
  • 3.42e3
88.56
  • 88.56
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.74e3
  • 3.74e3
87.48
  • 87.48
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.44e3
  • 4.44e3
85.12
  • 85.12
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.74e3
  • 4.74e3
84.14
  • 84.14
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.90e3
  • 4.90e3
  • 9.60e3
83.61
  • 83.61
  • 67.86
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.54e3
  • 5.54e3
81.47
  • 81.47
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
5.66e3
  • 5.66e3
  • 7.37e3
  • 1.40e4
  • 1.42e4
  • 1.68e4
81.06
  • 81.06
  • 75.32
  • 53.09
  • 52.55
  • 43.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
5.77e3
  • 5.77e3
  • 8.76e3
  • 1.20e4
80.69
  • 80.69
  • 70.67
  • 59.93
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.28e3
  • 6.28e3
78.98
  • 78.98
AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
7.97e3
  • 7.97e3
  • 8.96e3
  • 8.96e3
  • 8.96e3
  • 9.34e3
  • 9.67e3
  • 9.67e3
  • 1.23e4
  • 1.23e4
73.32
  • 73.32
  • 69.99
  • 69.99
  • 69.99
  • 68.74
  • 67.63
  • 67.63
  • 58.80
  • 58.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.24e3
  • 8.24e3
72.40
  • 72.40
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • UBERON:0000106zygote stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000017Gastrula:50%-epiboly
9.00e3
  • 9.00e3
  • 1.01e4
  • 1.01e4
  • 1.03e4
  • 1.03e4
  • 1.03e4
  • 1.04e4
  • 1.06e4
  • 1.06e4
  • 1.08e4
  • 1.08e4
  • 1.09e4
  • 1.10e4
  • 1.10e4
  • 1.32e4
69.88
  • 69.88
  • 66.06
  • 66.04
  • 65.49
  • 65.39
  • 65.35
  • 65.15
  • 64.42
  • 64.35
  • 63.97
  • 63.77
  • 63.58
  • 63.11
  • 63.01
  • 55.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
9.79e3
  • 9.79e3
  • 1.28e4
  • 1.42e4
67.22
  • 67.22
  • 57.04
  • 52.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000120lateral line ganglion
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
  • 9.96e3
66.66
  • 66.66
  • 66.66
AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.02e4
  • 1.02e4
  • 1.05e4
65.77
  • 65.77
  • 64.98
AEIR
  • AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.03e4
  • 1.03e4
  • 1.05e4
  • 1.32e4
  • 1.32e4
65.61
  • 65.61
  • 64.69
  • 55.86
  • 55.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003050olfactory placode
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.05e4
  • 1.05e4
  • 1.08e4
  • 1.08e4
64.98
  • 64.98
  • 63.87
  • 63.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.18e4
  • 1.18e4
  • 1.26e4
  • 1.45e4
60.40
  • 60.40
  • 57.78
  • 51.38
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000073905.

Cross-references

EnsemblENSDARG00000073905 (VWA5A (1 to many))
HGNCHGNC:6658 (VWA5A (1 to many))
ZFINZDB-GENE-040912-181 (zgc:92481)
EMBLCU855936
Uniprot/SPTREMBLE7FFM8, E7FFM8_DANRE, X1WDF6, X1WDF6_DANRE, X1WGS4, X1WGS4_DANRE

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