Gene: wnt6b - ENSDARG00000073935 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000073935
Name	wnt6b
Description	wingless-type MMTV integration site family, member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-513]
Organism	Danio rerio (zebrafish)
Synonym(s)	si:dkey-31m21.2, wnt6
Orthologs(s)	15 orthologs
Paralog(s)	18 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	1.41e4 1.41e4 1.77e4	52.88 52.88 40.80	AEIR AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.56e4 1.56e4	47.70 47.70	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages UBERON:0000068embryo stage ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5	1.75e4 1.75e4 1.82e4 1.95e4 2.02e4 2.41e4	41.56 41.56 39.11 34.87 32.20 19.35	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	2.03e4 2.03e4	32.10 32.10	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	2.10e4 2.10e4 2.24e4	29.79 29.79 24.93	AEIR AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	2.24e4 2.24e4	24.97 24.97	AEIR AEIR
UBERON:0000033	head	[+] 1 stage UBERON:0000066fully formed stage	2.36e4 2.36e4	21.07 21.07	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	15 species Homo sapiens (human) Mus musculus (mouse) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	15 genes ENSG00000115596 WNT6 ENSMUSG00000033227 Wnt6 ENSGGOG00000003259 WNT6 ENSMMUG00000017346 WNT6 ENSRNOG00000017409 Wnt6 ENSBTAG00000013990 WNT6 ENSECAG00000013092 WNT6 ENSOCUG00000024007 WNT6 ENSCAFG00000031321 WNT6 ENSFCAG00000022068 WNT6 ENSCPOG00000005229 WNT6 ENSMODG00000015364 WNT6 ENSGALG00000011358 Wnt6 ENSACAG00000014365 WNT6 ENSXETG00000013856 wnt6	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000073935.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Bilateria	1 gene ENSDARG00000038283 wnt6a	Compare expression	[+]
Metazoa	18 genes ENSDARG00000002483 WNT7A (1 to many) ENSDARG00000004256 wnt11 ENSDARG00000005050 wnt2ba ENSDARG00000014796 wnt11r ENSDARG00000022858 wnt7ba ENSDARG00000032234 wnt2bb ENSDARG00000038283 wnt6a ENSDARG00000038990 wnt3 ENSDARG00000040159 wnt4b ENSDARG00000041117 wnt2 ENSDARG00000044827 wnt7aa ENSDARG00000055554 wnt1 ENSDARG00000058822 wnt3a ENSDARG00000071107 wnt7bb ENSDARG00000071208 wnt4a ENSDARG00000094973 wnt16 ENSDARG00000102464 wnt5b ENSDARG00000104973 wnt5a	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000073935.

Cross-references

Ensembl	ENSDARG00000073935 (wnt6b)
ZFIN	ZDB-GENE-070912-513 (wnt6b)
EMBL	CR847976, CU151893
Uniprot/SPTREMBL	F1R205, F1R205_DANRE, F1RAB5, F1RAB5_DANRE