D. rerio Gene: prf1.7 - ENSDARG00000073969 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000073969
Nameprf1.7
Descriptionperforin 1.7 [Source:ZFIN;Acc:ZDB-GENE-111212-11]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-282e16.4
Orthologs(s)26 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.10e3
  • 3.10e3
89.61
  • 89.61
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.87e3
  • 8.87e3
70.32
  • 70.32
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.21
  • 52.21
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.59
  • 48.59
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.22
  • 41.22
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.86
  • 35.86
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
33.91
  • 33.91
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
33.62
  • 33.62
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
31.88
  • 31.88
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.72
  • 31.72
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.22
  • 31.22
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi2 genesCompare expression
Euteleostomi4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000073969.

Cross-references

EnsemblENSDARG00000073969 (prf1.7)
ZFINZDB-GENE-111212-11 (prf1.7)
EMBLBX547993
Uniprot/SPTREMBLI3ISE1, I3ISE1_DANRE, I3ITP0, I3ITP0_DANRE

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