D. rerio Gene: si:ch1073-159d7.7 - ENSDARG00000074012 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074012
Namesi:ch1073-159d7.7
Descriptionsi:ch1073-159d7.7 [Source:ZFIN;Acc:ZDB-GENE-160113-58]
OrganismDanio rerio (zebrafish)
Orthologs(s)77 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.24e4
  • 1.24e4
  • 1.70e4
58.48
  • 58.48
  • 43.12
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.28e4
  • 1.28e4
  • 1.38e4
57.00
  • 57.00
  • 53.73
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.44e4
  • 1.44e4
51.69
  • 51.69
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.88
  • 42.88
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.83e4
  • 1.83e4
  • 1.87e4
  • 2.15e4
38.56
  • 38.56
  • 37.36
  • 28.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.86e4
  • 1.86e4
  • 2.25e4
37.67
  • 37.67
  • 24.80
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.47
  • 35.47
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.15e4
  • 2.15e4
27.96
  • 27.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species77 genesCompare expression

Orthology information comes from OMA : ENSDARG00000074012.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi16 genesCompare expression
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000074012.

Cross-references

EnsemblENSDARG00000074012 (si:ch1073-159d7.7)
ZFINZDB-GENE-160113-58 (si:ch1073-159d7.7)
EMBLFP325123
Uniprot/SPTREMBLE7F2T3, E7F2T3_DANRE

Do not show this banner again