D. rerio Gene: myt1a - ENSDARG00000074030 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074030
Namemyt1a
Descriptionmyelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
OrganismDanio rerio (zebrafish)
Synonym(s)fc56h05, myt1, si:dkey-202m22.5, wu:fc56h05
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
620
  • 620
  • 1.49e3
  • 1.86e3
  • 7.27e3
97.93
  • 97.93
  • 95.02
  • 93.78
  • 75.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.12e3
  • 1.12e3
  • 1.25e3
  • 2.11e3
  • 2.15e3
  • 2.46e3
  • 3.61e3
  • 4.03e3
  • 4.34e3
  • 5.60e3
  • 7.14e3
96.25
  • 96.25
  • 95.83
  • 92.95
  • 92.80
  • 91.76
  • 87.90
  • 86.52
  • 85.49
  • 81.24
  • 76.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
2.06e3
  • 2.06e3
  • 2.11e3
  • 2.94e3
  • 4.18e3
  • 4.29e3
  • 6.04e3
  • 6.04e3
  • 7.43e3
  • 8.89e3
  • 9.48e3
  • 9.90e3
  • 9.96e3
  • 1.02e4
  • 1.03e4
93.09
  • 93.09
  • 92.92
  • 90.15
  • 85.99
  • 85.63
  • 79.78
  • 79.76
  • 75.13
  • 70.23
  • 68.27
  • 66.86
  • 66.66
  • 65.70
  • 65.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.84e3
  • 2.84e3
  • 7.13e3
90.50
  • 90.50
  • 76.11
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.22e3
  • 3.22e3
89.21
  • 89.21
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
3.79e3
  • 3.79e3
  • 4.33e3
  • 4.38e3
87.31
  • 87.31
  • 85.51
  • 85.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.19e3
  • 4.19e3
  • 4.21e3
85.96
  • 85.96
  • 85.92
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.24e3
  • 8.24e3
72.40
  • 72.40
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000023Segmentation:1-4 somites
8.79e3
  • 8.79e3
70.57
  • 70.57
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
9.53e3
  • 9.53e3
  • 1.09e4
  • 1.10e4
  • 1.13e4
  • 1.13e4
  • 1.20e4
68.08
  • 68.08
  • 63.50
  • 63.32
  • 62.32
  • 62.17
  • 59.74
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.06e4
  • 1.06e4
64.51
  • 64.51
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.62
  • 63.62
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.09e4
  • 1.09e4
  • 1.21e4
  • 1.21e4
  • 1.34e4
  • 1.35e4
63.40
  • 63.40
  • 59.51
  • 59.43
  • 55.03
  • 54.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.14e4
  • 1.14e4
61.67
  • 61.67
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
1.22e4
  • 1.22e4
59.07
  • 59.07
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.82
  • 57.82
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.93
  • 54.93
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.39e4
  • 1.39e4
53.56
  • 53.56
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.06
  • 52.06
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.53
  • 51.53
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.39
  • 43.39
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.64
  • 40.64
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.57
  • 39.57
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.61
  • 36.61
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.45
  • 36.45
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
32.90
  • 32.90
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.50
  • 32.50
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.73
  • 29.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000074030.

Cross-references

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