D. rerio Gene: si:dkey-4c15.5 - ENSDARG00000074125 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074125
Namesi:dkey-4c15.5
Descriptionsi:dkey-4c15.5 [Source:ZFIN;Acc:ZDB-GENE-050420-11]
OrganismDanio rerio (zebrafish)
Paralog(s)201 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
7.82e3
  • 7.82e3
  • 7.88e3
  • 1.12e4
  • 1.13e4
  • 1.28e4
73.82
  • 73.82
  • 73.60
  • 62.35
  • 62.20
  • 57.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
7.85e3
  • 7.85e3
  • 1.01e4
  • 1.22e4
  • 1.38e4
  • 1.38e4
  • 1.41e4
73.72
  • 73.72
  • 66.08
  • 59.03
  • 53.90
  • 53.85
  • 52.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
8.23e3
  • 8.23e3
  • 1.50e4
72.44
  • 72.44
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.97e3
  • 8.97e3
69.98
  • 69.98
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.72e3
  • 9.72e3
67.47
  • 67.47
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.73
  • 63.73
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
  • 1.50e4
62.65
  • 62.65
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.17
  • 62.17
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
1.20e4
  • 1.20e4
  • 1.31e4
  • 1.37e4
  • 1.47e4
  • 1.47e4
  • 1.55e4
  • 1.58e4
  • 1.58e4
59.81
  • 59.81
  • 56.08
  • 54.26
  • 50.94
  • 50.72
  • 48.22
  • 47.19
  • 46.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.68
  • 59.68
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.44
  • 59.44
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.26e4
  • 1.26e4
57.87
  • 57.87
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.68
  • 57.68
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.27e4
  • 1.27e4
57.53
  • 57.53
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.30e4
  • 1.30e4
  • 1.78e4
56.47
  • 56.47
  • 40.53
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.47
  • 55.47
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.42e4
55.04
  • 55.04
  • 52.29
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.63
  • 54.63
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.08
  • 53.08
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.03
  • 53.03
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.00
  • 53.00
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.42e4
  • 1.42e4
52.60
  • 52.60
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
1.44e4
  • 1.44e4
  • 1.47e4
  • 1.48e4
  • 1.53e4
  • 1.59e4
  • 1.63e4
  • 1.66e4
  • 1.77e4
  • 1.78e4
  • 1.79e4
  • 1.81e4
  • 1.83e4
  • 1.83e4
51.80
  • 51.80
  • 50.68
  • 50.61
  • 48.83
  • 46.69
  • 45.55
  • 44.51
  • 40.62
  • 40.56
  • 40.18
  • 39.42
  • 38.62
  • 38.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.65
  • 51.65
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
  • 1.58e4
51.07
  • 51.07
  • 47.03
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.95
  • 50.95
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.64e4
  • 1.64e4
  • 1.67e4
  • 1.78e4
45.12
  • 45.12
  • 44.22
  • 40.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.81
  • 39.81
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Clupeocephala201 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000074125.

Cross-references

EnsemblENSDARG00000074125 (si:dkey-4c15.5)
ZFINZDB-GENE-050420-11 (si:dkey-4c15.5)
EMBLAL929017, BC153394, BC155731, BX640537, CU074330
Uniprot/SPTREMBLA8DZC6, A8DZC6_DANRE, A9JRN6, A9JRN6_DANRE

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