D. rerio Gene: zgc:113452 - ENSDARG00000074146 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074146
Namezgc:113452
Descriptionzgc:113452 [Source:ZFIN;Acc:ZDB-GENE-050913-16]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch73-40a17.5
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.20e3
  • 4.20e3
85.95
  • 85.95
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.87e3
  • 4.87e3
83.70
  • 83.70
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
5.02e3
  • 5.02e3
  • 5.05e3
  • 8.40e3
  • 1.13e4
  • 1.20e4
83.18
  • 83.18
  • 83.09
  • 71.87
  • 62.24
  • 59.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.68e3
  • 6.68e3
77.65
  • 77.65
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.45e3
  • 7.45e3
75.05
  • 75.05
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
7.65e3
  • 7.65e3
  • 1.21e4
  • 1.25e4
74.40
  • 74.40
  • 59.44
  • 58.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.86e3
  • 7.86e3
73.70
  • 73.70
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.19e3
  • 8.19e3
72.58
  • 72.58
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.32e3
  • 8.32e3
72.13
  • 72.13
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.47e3
  • 8.47e3
71.66
  • 71.66
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
8.86e3
  • 8.86e3
  • 9.09e3
  • 9.11e3
  • 9.27e3
  • 9.56e3
  • 1.28e4
70.34
  • 70.34
  • 69.57
  • 69.51
  • 68.95
  • 68.00
  • 57.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
9.13e3
  • 9.13e3
  • 1.47e4
69.42
  • 69.42
  • 50.63
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
9.18e3
  • 9.18e3
  • 9.95e3
  • 1.01e4
  • 1.04e4
  • 1.08e4
  • 1.09e4
  • 1.16e4
  • 1.20e4
  • 1.22e4
  • 1.23e4
  • 1.23e4
  • 1.25e4
  • 1.27e4
  • 1.27e4
  • 1.50e4
  • 1.50e4
69.27
  • 69.27
  • 66.67
  • 66.17
  • 65.03
  • 63.87
  • 63.57
  • 61.28
  • 59.75
  • 59.28
  • 58.90
  • 58.82
  • 58.08
  • 57.53
  • 57.47
  • 49.92
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.99e3
  • 9.99e3
66.57
  • 66.57
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
1.01e4
  • 1.01e4
  • 1.09e4
  • 1.20e4
  • 1.21e4
  • 1.22e4
  • 1.28e4
  • 1.36e4
  • 1.41e4
  • 1.43e4
  • 1.44e4
66.24
  • 66.24
  • 63.44
  • 59.85
  • 59.58
  • 59.21
  • 57.04
  • 54.35
  • 52.79
  • 52.20
  • 51.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.81
  • 65.81
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.69
  • 63.69
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.09e4
  • 1.09e4
  • 1.25e4
63.48
  • 63.48
  • 58.27
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.10e4
  • 1.10e4
63.33
  • 63.33
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
  • 1.45e4
62.82
  • 62.82
  • 51.56
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.11e4
  • 1.11e4
62.76
  • 62.76
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.43
  • 61.43
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.17e4
  • 1.17e4
60.84
  • 60.84
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.18e4
  • 1.18e4
60.46
  • 60.46
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.21
  • 59.21
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
  • 1.27e4
58.82
  • 58.82
  • 57.34
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.33e4
  • 1.33e4
  • 1.37e4
  • 1.54e4
55.52
  • 55.52
  • 54.05
  • 48.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.57
  • 54.57
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.50e4
  • 1.50e4
  • 1.51e4
49.80
  • 49.80
  • 49.51
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.56
  • 49.56
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Vertebrata4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000074146.

Cross-references

EnsemblENSDARG00000074146 (zgc:113452)
ZFINZDB-GENE-050913-16 (zgc:113452), ZDB-GENE-131121-84 (znf1008)
EMBLCU928013
Uniprot/SPTREMBLE7FDT5, E7FDT5_DANRE, F1QEE5, F1QEE5_DANRE, F1QSS3, F1QSS3_DANRE

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