D. rerio Gene: slitrk5b - ENSDARG00000074153 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074153
Nameslitrk5b
DescriptionSLIT and NTRK-like family, member 5b [Source:ZFIN;Acc:ZDB-GENE-110408-55]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch73-211l20.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.50e3
  • 3.50e3
88.30
  • 88.30
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
5.73e3
  • 5.73e3
80.82
  • 80.82
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.05e3
  • 8.05e3
73.04
  • 73.04
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.46e3
  • 8.46e3
71.68
  • 71.68
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.65e3
  • 9.65e3
67.70
  • 67.70
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.97e3
  • 9.97e3
66.60
  • 66.60
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.02
  • 65.02
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.22e4
  • 1.22e4
59.09
  • 59.09
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.27e4
  • 1.27e4
57.61
  • 57.61
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.71
  • 52.71
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.03
  • 44.03
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
  • 2.32e4
40.09
  • 40.09
  • 22.20
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.99e4
  • 1.99e4
  • 2.39e4
33.43
  • 33.43
  • 19.94
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.35
  • 30.35
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
2.10e4
  • 2.10e4
  • 2.41e4
29.54
  • 29.54
  • 19.45
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
29.12
  • 29.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000074153 (slitrk5b)
ZFINZDB-GENE-110408-55 (slitrk5b)
EMBLCU539062
Uniprot/SPTREMBLE7FFN0, E7FFN0_DANRE

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