D. rerio Gene: zgc:172253 - ENSDARG00000074191 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074191
Namezgc:172253
Descriptionzgc:172253 [Source:ZFIN;Acc:ZDB-GENE-080215-9]
OrganismDanio rerio (zebrafish)
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
980
  • 980
96.72
  • 96.72
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.09e3
  • 5.09e3
82.96
  • 82.96
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
5.82e3
  • 5.82e3
  • 1.44e4
  • 1.51e4
  • 1.56e4
  • 1.85e4
80.52
  • 80.52
  • 51.86
  • 49.58
  • 47.70
  • 38.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
7.60e3
  • 7.60e3
  • 1.38e4
74.56
  • 74.56
  • 53.75
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.07e4
  • 1.07e4
  • 1.13e4
64.15
  • 64.15
  • 62.31
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.25
  • 62.25
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.17e4
  • 1.17e4
60.77
  • 60.77
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.52
  • 58.52
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.47e4
  • 1.47e4
  • 2.20e4
50.64
  • 50.64
  • 26.25
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.56e4
  • 1.56e4
47.80
  • 47.80
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.13
  • 44.13
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
40.97
  • 40.97
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.48
  • 40.48
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.80e4
  • 1.80e4
  • 1.82e4
39.84
  • 39.84
  • 39.01
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.76
  • 39.76
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.58
  • 36.58
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.63
  • 35.63
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
26.91
  • 26.91
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.43e4
  • 2.43e4
18.64
  • 18.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Clupeocephala5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000074191.

Cross-references

EnsemblENSDARG00000074191 (zgc:172253)
ZFINZDB-GENE-080215-9 (zgc:172253)
EMBLCU695221
Uniprot/SPTREMBLF1R5R5, F1R5R5_DANRE

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