D. rerio Gene: commd6 - ENSDARG00000074204 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074204
Namecommd6
DescriptionCOMM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-070912-209]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-222g23.3
Orthologs(s)2 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.06e3
  • 5.06e3
83.07
  • 83.07
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.87e3
  • 5.87e3
80.33
  • 80.33
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.18e3
  • 6.18e3
79.32
  • 79.32
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.28e3
  • 6.28e3
78.98
  • 78.98
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
6.30e3
  • 6.30e3
  • 6.70e3
78.92
  • 78.92
  • 77.55
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.55e3
  • 6.55e3
78.06
  • 78.06
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
6.56e3
  • 6.56e3
78.03
  • 78.03
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.89e3
  • 6.89e3
76.94
  • 76.94
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.09e3
  • 7.09e3
  • 1.35e4
76.28
  • 76.28
  • 54.92
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.15e3
  • 7.15e3
76.08
  • 76.08
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
7.23e3
  • 7.23e3
  • 7.54e3
  • 8.54e3
  • 1.01e4
  • 1.06e4
75.80
  • 75.80
  • 74.76
  • 71.42
  • 66.31
  • 64.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.24e3
  • 7.24e3
75.75
  • 75.75
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.39e3
  • 7.39e3
75.24
  • 75.24
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.01e3
  • 8.01e3
73.19
  • 73.19
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.31e3
  • 8.31e3
72.18
  • 72.18
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.48e3
  • 8.48e3
71.60
  • 71.60
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.60e3
  • 8.60e3
71.20
  • 71.20
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.76e3
  • 8.76e3
  • 9.53e3
70.68
  • 70.68
  • 68.08
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
8.87e3
  • 8.87e3
  • 1.39e4
70.31
  • 70.31
  • 53.61
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.99e3
  • 8.99e3
69.91
  • 69.91
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.08e3
  • 9.08e3
69.59
  • 69.59
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.53e3
  • 9.53e3
68.09
  • 68.09
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.01e4
  • 1.01e4
  • 1.11e4
66.31
  • 66.31
  • 62.80
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.10
  • 58.10
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi2 species2 genesCompare expression

Orthology information comes from OMA : ENSDARG00000074204.

Cross-references

EnsemblENSDARG00000074204 (commd6)
ZFINZDB-GENE-070912-209 (commd6)
EMBLBX571809
Uniprot/SPTREMBLE7F794, E7F794_DANRE, E9QCG0, E9QCG0_DANRE

Do not show this banner again