D. rerio Gene: zgc:110286 - ENSDARG00000074210 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074210
Namezgc:110286
Descriptionzgc:110286 [Source:ZFIN;Acc:ZDB-GENE-050417-68]
OrganismDanio rerio (zebrafish)
Paralog(s)31 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.38e3
  • 1.38e3
95.40
  • 95.40
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
2.55e3
  • 2.55e3
  • 4.41e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 6.97e3
  • 7.03e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.96e3
  • 8.96e3
91.46
  • 91.46
  • 85.22
  • 83.33
  • 78.12
  • 77.77
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.66
  • 76.46
  • 76.46
  • 74.99
  • 74.99
  • 74.99
  • 74.99
  • 73.52
  • 69.99
  • 69.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.84e3
  • 5.84e3
80.46
  • 80.46
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.55e3
  • 7.55e3
74.71
  • 74.71
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.08e4
  • 1.08e4
63.69
  • 63.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.21
  • 59.21
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.23e4
  • 1.23e4
58.67
  • 58.67
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.34
  • 54.34
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.10
  • 52.10
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.52
  • 51.52
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.45e4
  • 1.45e4
  • 1.69e4
51.44
  • 51.44
  • 43.57
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.86
  • 46.86
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.66
  • 46.66
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.08
  • 45.08
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
1.64e4
  • 1.64e4
  • 2.06e4
  • 2.08e4
44.98
  • 44.98
  • 30.88
  • 30.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.80
  • 44.80
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.71
  • 43.71
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.77e4
  • 1.77e4
40.59
  • 40.59
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
  • 1.97e4
38.99
  • 38.99
  • 33.98
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
38.97
  • 38.97
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.88e4
  • 1.88e4
  • 2.30e4
37.09
  • 37.09
  • 23.07
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.81
  • 35.81
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.32
  • 33.32
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.27
  • 33.27
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.45
  • 31.45
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.13e4
  • 2.13e4
28.83
  • 28.83
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
27.04
  • 27.04
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Paralogs (same species)

Cross-references

EnsemblENSDARG00000074210 (zgc:110286)
ZFINZDB-GENE-050417-68 (zgc:110286)
EMBLCU638695
Uniprot/SPTREMBLF1R8Q1, F1R8Q1_DANRE

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