Gene: zgc:158398 - ENSDARG00000074226 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000074226
Name	zgc:158398
Description	zgc:158398 [Source:ZFIN;Acc:ZDB-GENE-070820-3]
Organism	Danio rerio (zebrafish)

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.97e3 1.97e3	93.40 93.40	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	2.71e3 2.71e3	90.93 90.93	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	2.94e3 2.94e3	90.17 90.17	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	3.36e3 3.36e3	88.75 88.75	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	3.77e3 3.77e3	87.39 87.39	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	3.89e3 3.89e3 5.76e3	86.97 86.97 80.71	AEIR AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	3.94e3 3.94e3	86.83 86.83	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	4.07e3 4.07e3	86.36 86.36	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	4.28e3 4.28e3	85.67 85.67	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	4.54e3 4.54e3	84.80 84.80	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000022Gastrula:Bud ZFS:0000019Gastrula:Shield	4.67e3 4.67e3 8.04e3	84.36 84.36 73.06	AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	4.74e3 4.74e3 6.18e3	84.14 84.14 79.31	AEIR AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	4.88e3 4.88e3	83.65 83.65	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	5.33e3 5.33e3	82.15 82.15	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 ZFS:0000037Larval:Day 5 ZFS:0000033Hatching:Long-pec UBERON:0000068embryo stage	5.67e3 5.67e3 6.82e3 7.35e3 9.81e3 1.03e4	81.03 81.03 77.16 75.40 67.17 65.44	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	6.31e3 6.31e3	78.88 78.88	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	6.60e3 6.60e3	77.91 77.91	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	6.63e3 6.63e3	77.80 77.80	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	7.52e3 7.52e3	74.82 74.82	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	7.96e3 7.96e3 8.79e3	73.36 73.36 70.58	AEIR AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	8.39e3 8.39e3	71.93 71.93	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	9.53e3 9.53e3	68.10 68.10	AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	1.07e4 1.07e4	64.18 64.18	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000011Blastula:1k-cell ZFS:0000015Blastula:Dome	1.09e4 1.09e4 1.17e4	63.59 63.59 60.79	AEIR AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.19e4 1.19e4	60.26 60.26	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

Ensembl	ENSDARG00000074226 (zgc:158398)
ZFIN	ZDB-GENE-070820-3 (zgc:158398)
EMBL	CU138509
Uniprot/SPTREMBL	F1QNC7, F1QNC7_DANRE