D. rerio Gene: FAM20C (1 to many) - ENSDARG00000074317 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074317
NameFAM20C (1 to many)
Descriptionfamily with sequence similarity 20 member C [Source:HGNC Symbol;Acc:HGNC:22140]
OrganismDanio rerio (zebrafish)
Synonym(s)dkfzp547d065, dmp4, image:4942737
Orthologs(s)2 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.45e3
  • 6.45e3
78.41
  • 78.41
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.47
  • 51.47
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.60
  • 46.60
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.40
  • 45.40
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.36
  • 45.36
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.06
  • 45.06
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
  • 2.24e4
42.93
  • 42.93
  • 24.91
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.58
  • 40.58
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.79e4
  • 1.79e4
  • 2.07e4
  • 2.07e4
  • 2.15e4
  • 2.41e4
40.23
  • 40.23
  • 30.84
  • 30.79
  • 27.95
  • 19.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
38.94
  • 38.94
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.97e4
  • 1.97e4
  • 2.12e4
33.91
  • 33.91
  • 28.96
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
27.06
  • 27.06
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.31e4
  • 2.31e4
22.51
  • 22.51
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi2 species2 genesCompare expression

Orthology information comes from OMA : ENSDARG00000074317.

Cross-references

EnsemblENSDARG00000074317 (FAM20C (1 to many))
HGNCHGNC:22140 (FAM20C (1 to many))
EMBLBX321884, CABZ01062743
Uniprot/SPTREMBLA0A0G2L6H2, A0A0G2L6H2_DANRE, E7FBB8, E7FBB8_DANRE

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