Gene: KCNAB3 - ENSDARG00000074320 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000074320
Name	KCNAB3
Description	potassium channel, voltage gated subfamily A regulatory beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:6230]
Organism	Danio rerio (zebrafish)
Synonym(s)	akr6a9, kcna3b
Orthologs(s)	17 orthologs
Paralog(s)	4 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	1.38e3 1.38e3	95.37 95.37	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	7.99e3 7.99e3	73.24 73.24	AEIR AEIR
UBERON:0000922	embryo	[+] 4 stages ZFS:0000037Larval:Day 5 ZFS:0000033Hatching:Long-pec UBERON:0000068embryo stage UBERON:0004707pharyngula stage	1.17e4 1.17e4 1.77e4 2.00e4 2.34e4	60.94 60.94 40.82 33.01 21.71	AEIR AEIR AEIR AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	1.20e4 1.20e4 1.43e4	59.75 59.75 52.11	AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.61e4 1.61e4 2.09e4	46.23 46.23 29.96	AEIR AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.80e4 1.80e4	39.58 39.58	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.88e4 1.88e4	37.05 37.05	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	2.25e4 2.25e4	24.59 24.59	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	17 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	17 genes ENSG00000170049 KCNAB3 ENSMUSG00000018470 Kcnab3 ENSPTRG00000008716 KCNAB3 ENSGGOG00000006442 KCNAB3 ENSMMUG00000030333 KCNAB3 ENSRNOG00000008480 Kcnab3 ENSBTAG00000014940 KCNAB3 ENSECAG00000011019 KCNAB3 ENSOCUG00000017325 KCNAB3 ENSCAFG00000016888 KCNAB3 ENSFCAG00000009630 KCNAB3 ENSCPOG00000002028 KCNAB3 ENSEEUG00000015432 ENSMODG00000007554 KCNAB3 ENSOANG00000011684 KCNAB3 ENSACAG00000004127 KCNAB3 ENSXETG00000009066 kcnab3	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000074320.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	4 genes ENSDARG00000008140 kcnab1a ENSDARG00000040741 kcnab1b ENSDARG00000062134 kcnab2b ENSDARG00000087247 kcnab2a	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000074320.

Cross-references

Ensembl	ENSDARG00000074320 (KCNAB3)
HGNC	HGNC:6230 (KCNAB3)
EMBL	CABZ01083938, CABZ01083939, CABZ01083940, CABZ01083941
Uniprot/SPTREMBL	A0A0G2KU38, A0A0G2KU38_DANRE, A0A0G2L4Y6, A0A0G2L4Y6_DANRE, F1QIZ5, F1QIZ5_DANRE