D. rerio Gene: efcab2 - ENSDARG00000074323 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074323
Nameefcab2
DescriptionEF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
OrganismDanio rerio (zebrafish)
Orthologs(s)27 orthologs
Paralog(s)49 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
435
  • 435
98.55
  • 98.55
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.30
  • 66.30
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.04e4
  • 1.04e4
65.29
  • 65.29
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.12
  • 63.12
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.77
  • 62.77
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.14e4
  • 1.14e4
  • 1.26e4
  • 1.70e4
  • 1.83e4
  • 2.06e4
61.70
  • 61.70
  • 57.98
  • 43.14
  • 38.71
  • 31.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.45
  • 61.45
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.16e4
  • 1.16e4
  • 1.55e4
61.31
  • 61.31
  • 48.17
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.31e4
  • 1.31e4
  • 1.48e4
56.14
  • 56.14
  • 50.56
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.31e4
  • 1.31e4
56.10
  • 56.10
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.37e4
  • 1.37e4
  • 1.90e4
54.25
  • 54.25
  • 36.26
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.09
  • 48.09
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.63
  • 47.63
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.45
  • 47.45
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
  • 2.21e4
45.84
  • 45.84
  • 26.00
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.22
  • 43.22
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.87
  • 40.87
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.52
  • 29.52
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species16 genesCompare expression
Bilateria22 species27 genesCompare expression

Orthology information comes from OMA : ENSDARG00000074323.

Paralogs (same species)

Cross-references

EnsemblENSDARG00000074323 (efcab2)
ZFINZDB-GENE-070521-5 (efcab2)
Uniprot/SPTREMBLE7F627, E7F627_DANRE, X1WBK3, X1WBK3_DANRE

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