D. rerio Gene: zgc:171482 - ENSDARG00000074415 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074415
Namezgc:171482
Descriptionzgc:171482 [Source:ZFIN;Acc:ZDB-GENE-080204-84]
OrganismDanio rerio (zebrafish)
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
5.32e3
  • 5.32e3
82.20
  • 82.20
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.06e3
  • 9.06e3
69.65
  • 69.65
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.31
  • 59.31
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
  • 1.82e4
57.01
  • 57.01
  • 39.20
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
1.43e4
  • 1.43e4
  • 1.67e4
  • 2.00e4
  • 2.28e4
  • 2.32e4
52.28
  • 52.28
  • 44.14
  • 32.90
  • 23.70
  • 22.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.73e4
  • 1.73e4
42.24
  • 42.24
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.76e4
  • 1.76e4
41.11
  • 41.11
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.81e4
  • 1.81e4
  • 2.07e4
39.55
  • 39.55
  • 30.65
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
39.10
  • 39.10
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
35.12
  • 35.12
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
2.11e4
  • 2.11e4
  • 2.12e4
29.19
  • 29.19
  • 28.93
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
28.85
  • 28.85
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Bilateria2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000074415.

Cross-references

EnsemblENSDARG00000074415 (zgc:171482)
ZFINZDB-GENE-080204-84 (zgc:171482)
EMBLBC155068, CR376781, CT027704
Uniprot/SPTREMBLA9JST7, A9JST7_DANRE, F1QFB4, F1QFB4_DANRE, F1R3A5, F1R3A5_DANRE

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