D. rerio Gene: casc4 - ENSDARG00000074490 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074490
Namecasc4
Descriptioncancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
OrganismDanio rerio (zebrafish)
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
3.87e3
  • 3.87e3
  • 4.71e3
  • 7.32e3
  • 1.02e4
  • 1.03e4
87.06
  • 87.06
  • 84.23
  • 75.49
  • 65.90
  • 65.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
3.96e3
  • 3.96e3
  • 7.27e3
86.75
  • 86.75
  • 75.66
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.45e3
  • 4.45e3
  • 7.52e3
85.11
  • 85.11
  • 74.83
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
4.47e3
  • 4.47e3
  • 5.67e3
  • 5.75e3
  • 7.22e3
85.04
  • 85.04
  • 81.02
  • 80.73
  • 75.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.55e3
  • 4.55e3
84.78
  • 84.78
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
4.61e3
  • 4.61e3
  • 5.31e3
  • 5.55e3
  • 5.97e3
  • 6.75e3
  • 7.06e3
  • 8.36e3
  • 8.46e3
  • 9.31e3
  • 9.89e3
84.56
  • 84.56
  • 82.24
  • 81.40
  • 80.01
  • 77.42
  • 76.35
  • 72.01
  • 71.67
  • 68.84
  • 66.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.64e3
  • 4.64e3
84.46
  • 84.46
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.69e3
  • 4.69e3
84.31
  • 84.31
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.33e3
  • 5.33e3
82.16
  • 82.16
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.21e3
  • 6.21e3
79.22
  • 79.22
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
6.24e3
  • 6.24e3
  • 6.46e3
  • 7.64e3
  • 8.45e3
  • 9.24e3
  • 1.11e4
79.10
  • 79.10
  • 78.39
  • 74.41
  • 71.70
  • 69.08
  • 62.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.30e3
  • 6.30e3
78.90
  • 78.90
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.32e3
  • 6.32e3
78.85
  • 78.85
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.49e3
  • 6.49e3
78.28
  • 78.28
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000106zygote stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000020Gastrula:75%-epiboly
6.54e3
  • 6.54e3
  • 6.93e3
  • 6.97e3
  • 7.05e3
  • 7.37e3
  • 7.78e3
  • 8.10e3
  • 8.14e3
  • 8.52e3
  • 8.57e3
  • 8.72e3
  • 8.73e3
  • 8.74e3
  • 9.35e3
78.10
  • 78.10
  • 76.79
  • 76.65
  • 76.40
  • 75.32
  • 73.94
  • 72.89
  • 72.75
  • 71.47
  • 71.31
  • 70.82
  • 70.78
  • 70.74
  • 68.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.66e3
  • 6.66e3
77.71
  • 77.71
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
6.80e3
  • 6.80e3
  • 7.26e3
  • 7.46e3
77.25
  • 77.25
  • 75.71
  • 75.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.99e3
  • 6.99e3
76.61
  • 76.61
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.24e3
  • 7.24e3
75.78
  • 75.78
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.38e3
  • 7.38e3
75.29
  • 75.29
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.49e3
  • 7.49e3
74.92
  • 74.92
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.61e3
  • 7.61e3
74.51
  • 74.51
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.63e3
  • 7.63e3
74.46
  • 74.46
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.80e3
  • 7.80e3
73.88
  • 73.88
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.83e3
  • 7.83e3
73.77
  • 73.77
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.85e3
  • 7.85e3
73.73
  • 73.73
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.96e3
  • 7.96e3
73.34
  • 73.34
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.12e3
  • 8.12e3
  • 8.20e3
72.81
  • 72.81
  • 72.56
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.48e3
  • 8.48e3
71.62
  • 71.62
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
8.55e3
  • 8.55e3
  • 9.67e3
71.36
  • 71.36
  • 67.61
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.42e3
  • 9.42e3
68.45
  • 68.45
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.78e3
  • 9.78e3
67.24
  • 67.24
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.89e3
  • 9.89e3
66.89
  • 66.89
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000074490 (casc4)
ZFINZDB-GENE-091130-1 (casc4)
EMBLCR293520
Uniprot/SPTREMBLE7FBP9, E7FBP9_DANRE

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