Gene: si:ch211-213a13.11 - ENSDARG00000074546 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000074546
Name	si:ch211-213a13.11
Description	si:ch211-213a13.11 [Source:ZFIN;Acc:ZDB-GENE-070912-189]
Organism	Danio rerio (zebrafish)
Paralog(s)	12 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	2.65e3 2.65e3	91.13 91.13	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	4.44e3 4.44e3	85.14 85.14	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	5.43e3 5.43e3 1.44e4	81.83 81.83 51.74	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	6.13e3 6.13e3	79.48 79.48	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	6.26e3 6.26e3 1.86e4	79.06 79.06 37.72	AEIR AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	7.45e3 7.45e3	75.05 75.05	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	7.50e3 7.50e3	74.91 74.91	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	7.54e3 7.54e3	74.75 74.75	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	7.90e3 7.90e3	73.55 73.55	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	8.69e3 8.69e3	70.89 70.89	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	9.53e3 9.53e3	68.10 68.10	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.14e4 1.14e4	61.70 61.70	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.17e4 1.17e4	60.98 60.98	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.54e4 1.54e4	48.52 48.52	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.54e4 1.54e4	48.45 48.45	AEIR AEIR
UBERON:0000922	embryo	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage	1.61e4 1.61e4 2.77e4	46.14 46.14 7.41	AEIR AEIR AEIR
UBERON:0000307	blastula	[+] 1 stage ZFS:0000011Blastula:1k-cell	1.80e4 1.80e4	39.71 39.71	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.91e4 1.91e4 2.31e4	35.91 35.91 22.75	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	12 genes ENSDARG00000068453 CABZ01112732.1 ENSDARG00000068749 si:ch211-250k18.5 ENSDARG00000078002 si:dkey-13n15.11 ENSDARG00000086703 si:dkey-126g1.7 ENSDARG00000088689 si:ch211-201o1.1 ENSDARG00000088870 si:dkey-265e15.5 ENSDARG00000090192 si:dkey-16p6.1 ENSDARG00000093964 si:ch211-250k18.6 ENSDARG00000095665 si:ch211-191a16.2 ENSDARG00000102475 si:dkey-3p4.1 ENSDARG00000103143 si:dkey-19c16.12 ENSDARG00000105266 si:dkey-16p6.1	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000074546.

Cross-references

Ensembl	ENSDARG00000074546 (si:ch211-213a13.11)
ZFIN	ZDB-GENE-070912-189 (si:ch211-213a13.11)
EMBL	BX248395
Uniprot/SPTREMBL	F1R805, F1R805_DANRE