D. rerio Gene: CHST9 - ENSDARG00000074560 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074560
NameCHST9
Descriptionsi:ch211-269c21.2 [Source:ZFIN;Acc:ZDB-GENE-090313-104]
OrganismDanio rerio (zebrafish)
Synonym(s)galnac-4-st2, galnac4st-2
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.23e3
  • 7.23e3
75.79
  • 75.79
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.12e3
  • 9.12e3
69.47
  • 69.47
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.48
  • 64.48
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.15e4
  • 1.15e4
  • 1.81e4
61.45
  • 61.45
  • 39.50
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.78
  • 60.78
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
  • 1.95e4
59.59
  • 59.59
  • 34.62
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.53e4
55.21
  • 55.21
  • 48.89
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.36e4
  • 1.36e4
54.39
  • 54.39
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.36
  • 51.36
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
1.46e4
  • 1.46e4
  • 1.74e4
  • 1.75e4
  • 1.78e4
  • 1.78e4
  • 1.79e4
  • 1.81e4
50.96
  • 50.96
  • 41.85
  • 41.43
  • 40.56
  • 40.38
  • 40.18
  • 39.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
1.47e4
  • 1.47e4
  • 1.60e4
  • 1.75e4
50.71
  • 50.71
  • 46.27
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.51e4
  • 1.51e4
49.60
  • 49.60
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
1.55e4
  • 1.55e4
  • 1.67e4
  • 1.75e4
  • 1.78e4
  • 1.87e4
  • 1.89e4
48.18
  • 48.18
  • 43.99
  • 41.52
  • 40.54
  • 37.44
  • 36.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.55e4
  • 1.55e4
48.13
  • 48.13
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.66e4
  • 1.66e4
  • 1.66e4
  • 1.69e4
44.52
  • 44.52
  • 44.48
  • 43.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.80e4
  • 1.80e4
39.77
  • 39.77
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.49
  • 38.49
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.84e4
  • 1.84e4
38.41
  • 38.41
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.79
  • 34.79
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.77
  • 34.77
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.28
  • 31.28
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.26
  • 26.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000074560 (CHST9)
HGNCHGNC:19898 (CHST9)
ZFINZDB-GENE-090313-104 (si:ch211-269c21.2)
Uniprot/SPTREMBLF1RAR4, F1RAR4_DANRE

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