D. rerio Gene: fam57bb - ENSDARG00000074564 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074564
Namefam57bb
Descriptionfamily with sequence similarity 57, member Bb [Source:ZFIN;Acc:ZDB-GENE-110603-2]
OrganismDanio rerio (zebrafish)
Orthologs(s)15 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
4.49e3
  • 4.49e3
84.98
  • 84.98
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.50e3
  • 4.50e3
84.95
  • 84.95
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
8.09e3
  • 8.09e3
  • 1.25e4
72.92
  • 72.92
  • 58.01
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.21e3
  • 9.21e3
69.15
  • 69.15
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
9.22e3
  • 9.22e3
  • 9.44e3
  • 1.40e4
  • 1.65e4
  • 1.68e4
69.11
  • 69.11
  • 68.38
  • 53.25
  • 44.88
  • 43.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.23e4
  • 1.23e4
  • 1.49e4
58.97
  • 58.97
  • 50.05
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.79
  • 57.79
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.09
  • 53.09
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.51e4
  • 1.51e4
49.31
  • 49.31
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.56e4
  • 1.56e4
  • 1.77e4
47.91
  • 47.91
  • 40.82
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.26
  • 43.26
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
39.92
  • 39.92
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.31
  • 39.31
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
37.96
  • 37.96
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.89e4
  • 1.89e4
36.67
  • 36.67
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
36.10
  • 36.10
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.75
  • 31.75
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.67
  • 29.67
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.22e4
  • 2.22e4
25.53
  • 25.53
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
24.86
  • 24.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Clupeocephala1 geneCompare expression
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000074564.

Cross-references

EnsemblENSDARG00000074564 (fam57bb)
ZFINZDB-GENE-110603-2 (fam57bb)
EMBLCR762399
Uniprot/SPTREMBLE7FG14, E7FG14_DANRE

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