D. rerio Gene: graf4b - ENSDARG00000074582 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074582
Namegraf4b
DescriptionGDNF family receptor alpha 4b [Source:ZFIN;Acc:ZDB-GENE-130530-757]
OrganismDanio rerio (zebrafish)
Synonym(s)zmp:0000000754
Orthologs(s)3 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.56e3
  • 9.56e3
67.99
  • 67.99
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.55
  • 58.55
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.67
  • 54.67
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.41e4
  • 1.41e4
52.95
  • 52.95
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.43e4
  • 1.43e4
  • 1.63e4
52.00
  • 52.00
  • 45.54
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
  • 1.97e4
49.92
  • 49.92
  • 33.96
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
1.61e4
  • 1.61e4
  • 1.62e4
  • 1.72e4
  • 1.75e4
  • 1.92e4
46.03
  • 46.03
  • 45.69
  • 42.26
  • 41.27
  • 35.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.62
  • 44.62
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.56
  • 44.56
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.80e4
  • 1.80e4
39.70
  • 39.70
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.81e4
  • 1.81e4
39.27
  • 39.27
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.51
  • 32.51
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
27.21
  • 27.21
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.22e4
  • 2.22e4
25.64
  • 25.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi3 species3 genesCompare expression

Orthology information comes from OMA : ENSDARG00000074582.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Vertebrata5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000074582.

Cross-references

EnsemblENSDARG00000074582 (graf4b)
ZFINZDB-GENE-130530-757 (graf4b)
EMBLBX005043, BX247898
Uniprot/SPTREMBLE7F0C7, E7F0C7_DANRE

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