D. rerio Gene: loxhd1b - ENSDARG00000074638 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074638
Nameloxhd1b
Descriptionlipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-210e6.2
Orthologs(s)15 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.90e3
  • 8.90e3
70.19
  • 70.19
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.04
  • 63.04
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.80
  • 58.80
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.63e4
  • 1.63e4
  • 2.09e4
  • 2.22e4
  • 2.28e4
  • 2.41e4
45.43
  • 45.43
  • 29.87
  • 25.77
  • 23.81
  • 19.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.05
  • 45.05
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
31.12
  • 31.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000074638.

Cross-references

EnsemblENSDARG00000074638 (loxhd1b)
ZFINZDB-GENE-081104-370 (loxhd1b)
Uniprot/SPTREMBLF1R7Z3, F1R7Z3_DANRE

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