D. rerio Gene: cntf - ENSDARG00000074662 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074662
Namecntf
Descriptionciliary neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-090313-176]
OrganismDanio rerio (zebrafish)
Synonym(s)cntf2, si:dkey-117m1.3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.61e3
  • 2.61e3
91.28
  • 91.28
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.54e3
  • 4.54e3
84.81
  • 84.81
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.92e3
  • 4.92e3
83.52
  • 83.52
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.52e3
  • 5.52e3
  • 7.73e3
81.52
  • 81.52
  • 74.11
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.80e3
  • 6.80e3
77.24
  • 77.24
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.78e3
  • 7.78e3
73.94
  • 73.94
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
8.67e3
  • 8.67e3
  • 1.01e4
70.96
  • 70.96
  • 66.07
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
9.49e3
  • 9.49e3
  • 1.22e4
68.23
  • 68.23
  • 59.10
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.70e3
  • 9.70e3
67.51
  • 67.51
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.31
  • 66.31
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.04
  • 66.04
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.11
  • 65.11
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.47
  • 58.47
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.83
  • 56.83
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.22
  • 56.22
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.87
  • 55.87
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.60
  • 52.60
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.23
  • 50.23
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.58
  • 48.58
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.60e4
  • 1.60e4
  • 1.68e4
  • 1.70e4
  • 1.76e4
  • 2.01e4
46.53
  • 46.53
  • 43.65
  • 43.23
  • 41.01
  • 32.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.54
  • 43.54
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.79e4
  • 1.79e4
  • 1.95e4
40.18
  • 40.18
  • 34.62
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000074662 (cntf)
ZFINZDB-GENE-090313-176 (cntf)
EMBLCT737206
Uniprot/SPTREMBLB8JKE1, B8JKE1_DANRE

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