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D. rerio Gene: CA4 (1 to many) - ENSDARG00000074666 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074666
NameCA4 (1 to many)
Descriptionzgc:153760 [Source:ZFIN;Acc:ZDB-GENE-060929-528]
OrganismDanio rerio (zebrafish)
Synonym(s)caiv, car4, rp17, wu:fj17g10
Orthologs(s)4 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.03e4
  • 1.03e4
65.48
  • 65.48
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000049segmentation
1.49e4
  • 1.49e4
49.95
  • 49.95
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
1.55e4
  • 1.55e4
  • 1.75e4
  • 1.86e4
  • 2.16e4
48.05
  • 48.05
  • 41.56
  • 37.86
  • 27.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.14
  • 44.14
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
41.91
  • 41.91
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.85e4
  • 1.85e4
  • 2.01e4
38.18
  • 38.18
  • 32.64
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
33.92
  • 33.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000074666.

Cross-references

EnsemblENSDARG00000074666 (CA4 (1 to many))
HGNCHGNC:1375 (CA4 (1 to many))
ZFINZDB-GENE-060929-528 (zgc:153760)
EMBLCU571308
Uniprot/SPTREMBLF1QTX6, F1QTX6_DANRE

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