D. rerio Gene: ppm1j - ENSDARG00000074690 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074690
Nameppm1j
Descriptionprotein phosphatase, Mg2+/Mn2+ dependent, 1J [Source:ZFIN;Acc:ZDB-GENE-091230-9]
OrganismDanio rerio (zebrafish)
Orthologs(s)7 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.14e3
  • 4.14e3
86.13
  • 86.13
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.96e3
  • 6.96e3
76.69
  • 76.69
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.83e3
  • 7.83e3
73.77
  • 73.77
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.08e4
  • 1.08e4
63.78
  • 63.78
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.33
  • 63.33
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.14e4
  • 1.14e4
  • 1.69e4
61.74
  • 61.74
  • 43.58
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.83
  • 60.83
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.77
  • 60.77
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.37e4
  • 1.37e4
  • 1.53e4
54.26
  • 54.26
  • 48.61
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.91
  • 52.91
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
47.94
  • 47.94
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.62e4
  • 1.62e4
  • 1.63e4
45.62
  • 45.62
  • 45.31
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.64e4
  • 1.64e4
  • 1.76e4
  • 1.96e4
  • 1.98e4
  • 2.01e4
45.23
  • 45.23
  • 41.19
  • 34.26
  • 33.81
  • 32.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.73
  • 44.73
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.66
  • 43.66
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.69e4
  • 1.69e4
  • 1.94e4
43.56
  • 43.56
  • 35.19
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.43
  • 42.43
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.69
  • 41.69
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.78
  • 40.78
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.63
  • 37.63
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.73
  • 36.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Orthology information comes from OMA : ENSDARG00000074690.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000074690.

Cross-references

EnsemblENSDARG00000074690 (ppm1j)
ZFINZDB-GENE-091230-9 (ppm1j)
EMBLCU469362
Uniprot/SPTREMBLX1WCB3, X1WCB3_DANRE

Do not show this banner again