D. rerio Gene: si:ch211-186e20.2 - ENSDARG00000074712 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074712
Namesi:ch211-186e20.2
Descriptionsi:ch211-186e20.2 [Source:ZFIN;Acc:ZDB-GENE-110407-8]
OrganismDanio rerio (zebrafish)
Orthologs(s)13 orthologs
Paralog(s)15 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.22e3
  • 1.22e3
95.91
  • 95.91
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.76e3
  • 5.76e3
80.71
  • 80.71
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.07e3
  • 6.07e3
79.69
  • 79.69
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.85e3
  • 6.85e3
77.08
  • 77.08
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.62
  • 60.62
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.94
  • 57.94
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.30
  • 51.30
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
35.13
  • 35.13
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
1.94e4
  • 1.94e4
  • 2.13e4
  • 2.30e4
  • 2.49e4
34.93
  • 34.93
  • 28.67
  • 22.98
  • 16.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.99e4
  • 1.99e4
  • 2.75e4
33.37
  • 33.37
  • 7.97
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.63
  • 32.63
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
27.40
  • 27.40
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.53e4
  • 2.53e4
15.31
  • 15.31
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi3 genesCompare expression
Euteleostomi5 genesCompare expression
Opisthokonta8 genesCompare expression
Eukaryota15 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000074712.

Cross-references

EnsemblENSDARG00000074712 (si:ch211-186e20.2)
ZFINZDB-GENE-110407-8 (si:ch211-186e20.2)
EMBLCR559930
Uniprot/SPTREMBLE7FF11, E7FF11_DANRE, F8W3S9, F8W3S9_DANRE

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