D. rerio Gene: hlfa - ENSDARG00000074752 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074752
Namehlfa
Descriptionhepatic leukemia factor a [Source:ZFIN;Acc:ZDB-GENE-061013-159]
OrganismDanio rerio (zebrafish)
Synonym(s)hlf1, zgc:153035, zgc:153035gn, zhlf1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
604
  • 604
  • 3.35e3
  • 5.61e3
97.96062
  • 97.96062
  • 88.67571
  • 81.05849
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
741
  • 741
  • 2.69e3
97.49802
  • 97.49802
  • 90.91911
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
808
  • 808
  • 1.18e3
  • 1.50e3
  • 2.55e3
  • 5.59e3
  • 9.75e3
  • 9.90e3
  • 1.03e4
  • 1.05e4
  • 1.12e4
  • 1.14e4
  • 1.29e4
97.27273
  • 97.27273
  • 96.02236
  • 94.94152
  • 91.38191
  • 81.09615
  • 67.05156
  • 66.55180
  • 65.14738
  • 64.50374
  • 62.20043
  • 61.32208
  • 56.51364
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
834
  • 834
  • 8.36e3
97.18522
  • 97.18522
  • 71.75130
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.38e3
  • 1.38e3
  • 2.31e3
  • 2.36e3
95.34234
  • 95.34234
  • 92.18590
  • 92.04073
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.48e3
  • 1.48e3
95.00248
  • 95.00248
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.60e3
  • 1.60e3
94.58844
  • 94.58844
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.77e3
  • 1.77e3
94.03782
  • 94.03782
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.97e3
  • 1.97e3
  • 3.23e3
93.33142
  • 93.33142
  • 89.09183
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.27e3
  • 2.27e3
92.32082
  • 92.32082
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.79e3
  • 2.79e3
90.56896
  • 90.56896
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
2.99e3
  • 2.99e3
  • 5.14e3
  • 7.62e3
  • 1.06e4
  • 1.07e4
  • 1.08e4
  • 1.08e4
  • 1.21e4
  • 1.31e4
  • 1.35e4
89.88478
  • 89.88478
  • 82.63588
  • 74.25437
  • 64.05746
  • 63.94396
  • 63.54047
  • 63.51515
  • 59.01082
  • 55.80755
  • 54.40150
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.01e3
  • 3.01e3
89.81417
  • 89.81417
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.35e3
  • 4.35e3
85.30073
  • 85.30073
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.89e3
  • 4.89e3
83.49247
  • 83.49247
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.81e3
  • 5.81e3
80.36943
  • 80.36943
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.24e3
  • 6.24e3
78.90592
  • 78.90592
AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000033Hatching:Long-pec
6.34e3
  • 6.34e3
  • 1.25e4
78.56975
  • 78.56975
  • 57.87109
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.54e3
  • 6.54e3
77.89870
  • 77.89870
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.23e3
  • 8.23e3
72.18664
  • 72.18664
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.03e4
  • 1.03e4
65.03733
  • 65.03733
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.04e4
  • 1.04e4
64.99217
  • 64.99217
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.20e4
  • 1.20e4
59.56115
  • 59.56115
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
1.31e4
  • 1.31e4
  • 1.44e4
  • 1.47e4
  • 1.67e4
55.67363
  • 55.67363
  • 51.20869
  • 50.33275
  • 43.45306
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003052midbrain-hindbrain boundary
  • ZFS:0000033Hatching:Long-pec
1.48e4
  • 1.48e4
49.98479
  • 49.98479
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.29805
  • 44.29805
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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