D. rerio Gene: abcd1 - ENSDARG00000074876 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074876
Nameabcd1
DescriptionATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:172102

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.42e3
  • 8.42e3
71.79453
  • 71.79453
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.78e3
  • 8.78e3
70.60014
  • 70.60014
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.89e3
  • 9.89e3
66.88879
  • 66.88879
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.14e4
  • 1.14e4
  • 1.39e4
61.68921
  • 61.68921
  • 53.31460
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.90614
  • 60.90614
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.22e4
  • 1.22e4
59.29491
  • 59.29491
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.23e4
  • 1.23e4
  • 1.35e4
58.83853
  • 58.83853
  • 54.90333
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.33851
  • 57.33851
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.17828
  • 52.17828
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.22603
  • 50.22603
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.60e4
  • 1.60e4
46.38399
  • 46.38399
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.25704
  • 46.25704
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
43.92951
  • 43.92951
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.45267
  • 43.45267
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.81429
  • 41.81429
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.76e4
  • 1.76e4
41.00422
  • 41.00422
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.79e4
  • 1.79e4
  • 1.96e4
  • 2.05e4
  • 2.11e4
  • 2.25e4
40.19389
  • 40.19389
  • 34.43391
  • 31.51425
  • 29.46415
  • 24.64468
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.72139
  • 39.72139
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.38864
  • 38.38864
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.25383
  • 38.25383
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.37327
  • 31.37327
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.64511
  • 30.64511
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.28e4
  • 2.28e4
  • 2.28e4
23.81797
  • 23.81797
  • 23.67666
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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