D. rerio Gene: si:ch211-241d21.5 - ENSDARG00000074889 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000074889
Namesi:ch211-241d21.5
Descriptionsi:ch211-241d21.5 [Source:ZFIN;Acc:ZDB-GENE-081104-194]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-241d21.4
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.63e3
  • 2.63e3
91.19
  • 91.19
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.30e3
  • 3.30e3
88.95
  • 88.95
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.96e3
  • 5.96e3
80.03
  • 80.03
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
6.15e3
  • 6.15e3
  • 1.08e4
79.41
  • 79.41
  • 63.73
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.01e3
  • 8.01e3
73.17
  • 73.17
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.27e3
  • 8.27e3
72.30
  • 72.30
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
8.77e3
  • 8.77e3
  • 8.84e3
  • 1.13e4
  • 1.42e4
  • 1.57e4
70.64
  • 70.64
  • 70.41
  • 62.11
  • 52.35
  • 47.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.93e3
  • 8.93e3
  • 1.53e4
70.09
  • 70.09
  • 48.60
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.14e3
  • 9.14e3
69.40
  • 69.40
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
9.61e3
  • 9.61e3
  • 1.15e4
67.81
  • 67.81
  • 61.38
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.92e3
  • 9.92e3
66.78
  • 66.78
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.03e4
  • 1.03e4
  • 1.38e4
65.40
  • 65.40
  • 53.82
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.86
  • 64.86
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.54
  • 64.54
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.98
  • 63.98
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.81
  • 60.81
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.14
  • 58.14
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.70
  • 57.70
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.85
  • 55.85
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
  • 2.14e4
53.88
  • 53.88
  • 28.18
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.33
  • 53.33
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.78
  • 52.78
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.36
  • 50.36
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.81
  • 45.81
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000074889 (si:ch211-241d21.5)
ZFINZDB-GENE-081104-194 (si:ch211-241d21.5)
EMBLCT025742
Uniprot/SPTREMBLB8JJK1, B8JJK1_DANRE, F1RDM9, F1RDM9_DANRE

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