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D. rerio Gene: GTPBP8 - ENSDARG00000075033 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000075033
NameGTPBP8
Descriptionsi:rp71-84d19.3 [Source:ZFIN;Acc:ZDB-GENE-070912-719]
OrganismDanio rerio (zebrafish)
Synonym(s)gtpbp8, hspc135
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
6.99e3
  • 6.99e3
  • 7.56e3
76.59
  • 76.59
  • 74.69
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
7.49e3
  • 7.49e3
74.92
  • 74.92
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.20e3
  • 8.20e3
72.54
  • 72.54
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
8.38e3
  • 8.38e3
  • 1.01e4
71.94
  • 71.94
  • 66.27
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.20e3
  • 9.20e3
69.21
  • 69.21
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.76e3
  • 9.76e3
67.33
  • 67.33
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.83e3
  • 9.83e3
67.08
  • 67.08
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
9.98e3
  • 9.98e3
  • 1.14e4
  • 1.44e4
  • 1.59e4
  • 1.75e4
66.57
  • 66.57
  • 61.98
  • 51.68
  • 46.63
  • 41.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.61
  • 63.61
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.35
  • 63.35
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.36
  • 61.36
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.15e4
  • 1.15e4
  • 1.22e4
61.36
  • 61.36
  • 59.00
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.74
  • 58.74
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.25e4
  • 1.25e4
  • 1.74e4
58.29
  • 58.29
  • 41.77
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.65
  • 57.65
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.12
  • 56.12
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.59
  • 53.59
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.88
  • 52.88
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.56
  • 52.56
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.28
  • 51.28
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
  • 1.62e4
50.85
  • 50.85
  • 45.75
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.66
  • 49.66
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.12
  • 48.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000075033 (GTPBP8)
HGNCHGNC:25007 (GTPBP8)
ZFINZDB-GENE-070912-719 (si:rp71-84d19.3)
EMBLBX928746
Uniprot/SWISSPROTB0S8I0, GTPB8_DANRE

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