D. rerio Gene: CR318653.1 - ENSDARG00000075140 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000075140
NameCR318653.1
Description-
OrganismDanio rerio (zebrafish)
Orthologs(s)7 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
4.30e3
  • 4.30e3
85.59
  • 85.59
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.12e3
  • 6.12e3
  • 1.04e4
79.52
  • 79.52
  • 65.18
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
8.62e3
  • 8.62e3
  • 1.01e4
  • 1.11e4
  • 1.34e4
  • 1.52e4
71.14
  • 71.14
  • 66.11
  • 62.97
  • 55.25
  • 49.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.03e4
  • 1.03e4
  • 1.40e4
65.38
  • 65.38
  • 53.06
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.05e4
  • 1.05e4
  • 1.30e4
64.84
  • 64.84
  • 56.32
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.05e4
  • 1.05e4
64.76
  • 64.76
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.14e4
  • 1.14e4
  • 1.16e4
61.73
  • 61.73
  • 61.22
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.16e4
  • 1.16e4
61.15
  • 61.15
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
  • 1.61e4
60.36
  • 60.36
  • 46.22
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.00
  • 59.00
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.60
  • 55.60
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.09
  • 55.09
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.39e4
  • 1.39e4
53.47
  • 53.47
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.08
  • 51.08
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.33
  • 50.33
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
44.99
  • 44.99
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.22
  • 44.22
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.20
  • 44.20
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.20
  • 44.20
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
40.92
  • 40.92
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.73
  • 38.73
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
27.38
  • 27.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Orthology information comes from OMA : ENSDARG00000075140.

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000075140.

Cross-references

EnsemblENSDARG00000075140 (CR318653.1)
Uniprot/SPTREMBLE7F0P8, E7F0P8_DANRE

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