D. rerio Gene: nck1b - ENSDARG00000075369 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000075369
Namenck1b
DescriptionNCK adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-090317-1]
OrganismDanio rerio (zebrafish)
Synonym(s)nck1
Orthologs(s)23 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
2.37e3
  • 2.37e3
  • 3.08e3
92.07
  • 92.07
  • 89.69
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.57e3
  • 2.57e3
91.39
  • 91.39
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.75e3
  • 2.75e3
90.80
  • 90.80
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
3.53e3
  • 3.53e3
  • 3.56e3
  • 3.68e3
  • 3.73e3
  • 3.76e3
  • 4.01e3
  • 4.02e3
  • 4.06e3
  • 4.12e3
  • 4.43e3
  • 5.16e3
  • 5.37e3
  • 5.41e3
  • 7.23e3
88.20
  • 88.20
  • 88.10
  • 87.68
  • 87.51
  • 87.40
  • 86.58
  • 86.55
  • 86.41
  • 86.20
  • 85.17
  • 82.71
  • 82.02
  • 81.89
  • 75.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
3.55e3
  • 3.55e3
  • 4.04e3
  • 4.23e3
  • 4.25e3
  • 4.26e3
  • 4.37e3
  • 4.43e3
  • 4.90e3
  • 4.93e3
  • 6.45e3
88.10
  • 88.10
  • 86.48
  • 85.84
  • 85.77
  • 85.73
  • 85.36
  • 85.16
  • 83.58
  • 83.51
  • 78.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.69e3
  • 3.69e3
87.65
  • 87.65
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
3.89e3
  • 3.89e3
  • 5.22e3
86.98
  • 86.98
  • 82.53
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.15e3
  • 4.15e3
86.12
  • 86.12
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.31e3
  • 4.31e3
85.58
  • 85.58
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.42e3
  • 4.42e3
85.20
  • 85.20
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
4.45e3
  • 4.45e3
  • 4.91e3
  • 5.21e3
85.11
  • 85.11
  • 83.58
  • 82.55
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.73e3
  • 4.73e3
84.17
  • 84.17
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
4.88e3
  • 4.88e3
  • 4.97e3
  • 5.85e3
  • 7.51e3
83.68
  • 83.68
  • 83.36
  • 80.43
  • 74.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
4.93e3
  • 4.93e3
  • 5.13e3
  • 5.20e3
  • 6.04e3
  • 6.07e3
  • 6.35e3
83.48
  • 83.48
  • 82.81
  • 82.60
  • 79.78
  • 79.66
  • 78.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.98e3
  • 4.98e3
83.34
  • 83.34
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.15e3
  • 5.15e3
  • 6.04e3
82.77
  • 82.77
  • 79.78
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.18e3
  • 5.18e3
  • 8.91e3
82.64
  • 82.64
  • 70.15
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.47e3
  • 5.47e3
81.69
  • 81.69
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.09e3
  • 6.09e3
79.60
  • 79.60
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
6.31e3
  • 6.31e3
  • 6.56e3
  • 7.58e3
  • 7.81e3
  • 8.78e3
78.87
  • 78.87
  • 78.03
  • 74.63
  • 73.86
  • 70.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.81e3
  • 6.81e3
77.21
  • 77.21
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.94e3
  • 6.94e3
76.77
  • 76.77
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.27e3
  • 7.27e3
75.64
  • 75.64
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.29e3
  • 7.29e3
75.60
  • 75.60
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.75e3
  • 7.75e3
74.04
  • 74.04
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.69e3
  • 8.69e3
70.90
  • 70.90
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.70e3
  • 8.70e3
70.89
  • 70.89
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.10e3
  • 9.10e3
69.54
  • 69.54
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.34e3
  • 9.34e3
68.72
  • 68.72
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.37
  • 61.37
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSDARG00000075369.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata2 genesCompare expression
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000075369.

Cross-references

EnsemblENSDARG00000075369 (nck1b)
ZFINZDB-GENE-090317-1 (nck1b)
EMBLCR855858, CT583671
Uniprot/SPTREMBLE7F6M0, E7F6M0_DANRE

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