D. rerio Gene: si:ch211-267e7.3 - ENSDARG00000075487 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000075487
Namesi:ch211-267e7.3
Descriptionsi:ch211-267e7.3 [Source:ZFIN;Acc:ZDB-GENE-070912-265]
OrganismDanio rerio (zebrafish)
Orthologs(s)4 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
5.16e3
  • 5.16e3
  • 6.72e3
  • 6.76e3
  • 1.23e4
  • 1.80e4
82.74
  • 82.74
  • 77.51
  • 77.36
  • 58.80
  • 39.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
6.04e3
  • 6.04e3
79.79
  • 79.79
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
7.86e3
  • 7.86e3
  • 1.59e4
73.69
  • 73.69
  • 46.69
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.51e3
  • 8.51e3
71.52
  • 71.52
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.19e4
  • 1.19e4
60.23
  • 60.23
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.61
  • 41.61
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
1.81e4
  • 1.81e4
39.45
  • 39.45
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.25
  • 37.25
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
36.18
  • 36.18
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
36.04
  • 36.04
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.31e4
  • 2.31e4
22.53
  • 22.53
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000075487.

Cross-references

EnsemblENSDARG00000075487 (si:ch211-267e7.3)
ZFINZDB-GENE-070912-265 (si:ch211-267e7.3)
EMBLAL954134
Uniprot/SPTREMBLE7FE04, E7FE04_DANRE

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