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D. rerio Gene: tsc22d3 - ENSDARG00000075666 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000075666
Nametsc22d3
DescriptionTSC22 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1433]
OrganismDanio rerio (zebrafish)
Synonym(s)gilz, zgc:65831, zgc:77028
Orthologs(s)13 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
175
  • 175
99.42
  • 99.42
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
197
  • 197
99.34
  • 99.34
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
372
  • 372
  • 529
98.76
  • 98.76
  • 98.23
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
402
  • 402
98.66
  • 98.66
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
451
  • 451
98.49
  • 98.49
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
474
  • 474
98.42
  • 98.42
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
570
  • 570
98.09
  • 98.09
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
578
  • 578
98.07
  • 98.07
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
623
  • 623
97.92
  • 97.92
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
943
  • 943
96.85
  • 96.85
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.11e3
  • 1.11e3
  • 3.96e3
  • 4.72e3
  • 5.02e3
  • 5.97e3
  • 1.10e4
  • 1.13e4
  • 1.18e4
  • 1.20e4
  • 1.21e4
96.30
  • 96.30
  • 86.73
  • 84.19
  • 83.20
  • 80.00
  • 63.08
  • 62.05
  • 60.50
  • 59.77
  • 59.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
1.18e3
  • 1.18e3
  • 1.01e4
  • 1.25e4
96.04
  • 96.04
  • 66.28
  • 58.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.21e3
  • 1.21e3
  • 1.71e3
95.97
  • 95.97
  • 94.27
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.25e3
  • 1.25e3
95.80
  • 95.80
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.38e3
  • 1.38e3
95.39
  • 95.39
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.80e3
  • 1.80e3
93.96
  • 93.96
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.84e3
  • 1.84e3
93.86
  • 93.86
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.08e3
  • 2.08e3
93.03
  • 93.03
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
2.13e3
  • 2.13e3
  • 9.41e3
92.87
  • 92.87
  • 68.50
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
2.27e3
  • 2.27e3
  • 3.67e3
  • 5.90e3
92.42
  • 92.42
  • 87.72
  • 80.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
2.98e3
  • 2.98e3
  • 1.00e4
  • 1.44e4
  • 1.58e4
90.02
  • 90.02
  • 66.45
  • 51.74
  • 47.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
3.91e3
  • 3.91e3
  • 5.54e3
  • 1.09e4
  • 1.12e4
86.92
  • 86.92
  • 81.47
  • 63.48
  • 62.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.17e3
  • 4.17e3
86.03
  • 86.03
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000066fully formed stage
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
5.17e3
  • 5.17e3
  • 6.79e3
  • 7.92e3
  • 8.79e3
  • 9.38e3
  • 1.15e4
  • 1.15e4
  • 1.19e4
  • 1.19e4
  • 1.20e4
  • 1.21e4
  • 1.21e4
  • 1.21e4
  • 1.26e4
  • 1.27e4
  • 1.48e4
  • 1.50e4
  • 1.50e4
82.70
  • 82.70
  • 77.27
  • 73.48
  • 70.58
  • 68.59
  • 61.65
  • 61.60
  • 60.28
  • 60.28
  • 59.91
  • 59.61
  • 59.44
  • 59.32
  • 57.67
  • 57.51
  • 50.44
  • 49.92
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.33e3
  • 5.33e3
82.14
  • 82.14
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
6.82e3
  • 6.82e3
  • 7.50e3
  • 9.88e3
  • 9.92e3
  • 1.05e4
  • 1.13e4
77.18
  • 77.18
  • 74.90
  • 66.93
  • 66.78
  • 64.95
  • 62.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
9.04e3
  • 9.04e3
  • 1.45e4
69.73
  • 69.73
  • 51.36
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.07e4
  • 1.07e4
64.27
  • 64.27
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.19e4
  • 1.19e4
60.25
  • 60.25
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.22e4
  • 1.22e4
59.13
  • 59.13
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
1.26e4
  • 1.26e4
  • 1.30e4
57.84
  • 57.84
  • 56.48
AEIR
  • AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
56.94
  • 56.94
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.01
  • 55.01
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.65e4
  • 1.65e4
44.73
  • 44.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000075666 (tsc22d3)
ZFINZDB-GENE-040426-1433 (tsc22d3)
EMBLAL954136, BC056586, BC068985
Uniprot/SPTREMBLQ6NTI0, Q6NTI0_DANRE

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