D. rerio Gene: ppp4cb - ENSDARG00000076439 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000076439
Nameppp4cb
Descriptionprotein phosphatase 4, catalytic subunit b [Source:ZFIN;Acc:ZDB-GENE-080219-32]
OrganismDanio rerio (zebrafish)
Synonym(s)pp4c-b, zgc:172126
Orthologs(s)24 orthologs
Paralog(s)11 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
172
  • 172
99.43
  • 99.43
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
247
  • 247
99.18
  • 99.18
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
373
  • 373
  • 591
98.76
  • 98.76
  • 98.03
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.14e3
  • 1.14e3
  • 1.39e3
96.20
  • 96.20
  • 95.33
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.15e3
  • 1.15e3
96.15
  • 96.15
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.45e3
  • 1.45e3
  • 1.51e3
  • 1.68e3
  • 2.58e3
  • 4.73e3
95.15
  • 95.15
  • 94.96
  • 94.39
  • 91.36
  • 84.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.49e3
  • 1.49e3
  • 3.43e3
95.01
  • 95.01
  • 88.52
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.74e3
  • 1.74e3
94.18
  • 94.18
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.79e3
  • 1.79e3
94.02
  • 94.02
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.31e3
  • 2.31e3
92.27
  • 92.27
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
2.50e3
  • 2.50e3
  • 3.35e3
  • 1.12e4
  • 1.12e4
91.64
  • 91.64
  • 88.80
  • 62.50
  • 62.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.54e3
  • 2.54e3
91.50
  • 91.50
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.64e3
  • 2.64e3
91.16
  • 91.16
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.71e3
  • 2.71e3
  • 3.70e3
90.94
  • 90.94
  • 87.62
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.77e3
  • 2.77e3
90.73
  • 90.73
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.85e3
  • 2.85e3
90.45
  • 90.45
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
89.82
  • 89.82
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.12e3
  • 3.12e3
89.56
  • 89.56
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.59e3
  • 3.59e3
87.97
  • 87.97
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
3.88e3
  • 3.88e3
87.02
  • 87.02
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.95e3
  • 3.95e3
86.78
  • 86.78
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.40e3
  • 4.40e3
85.27
  • 85.27
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.76e3
  • 4.76e3
84.06
  • 84.06
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.79e3
  • 5.79e3
80.62
  • 80.62
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.81e3
  • 5.81e3
80.54
  • 80.54
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
6.79e3
  • 6.79e3
  • 7.47e3
  • 8.96e3
  • 1.09e4
  • 1.45e4
  • 1.47e4
  • 1.50e4
77.27
  • 77.27
  • 74.99
  • 69.99
  • 63.61
  • 51.42
  • 50.68
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0005772fertilized egg (Danio)
  • UBERON:0000106zygote stage
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0004750blastoderm
  • ZFS:0000019Gastrula:Shield
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000076439.

Paralogs (same species)

Cross-references

EnsemblENSDARG00000076439 (ppp4cb)
ZFINZDB-GENE-080219-32 (ppp4cb)
EMBLAL929495, BC155609
Uniprot/SPTREMBLF8W259, F8W259_DANRE
Uniprot/SWISSPROTA9JRC7, PP4CB_DANRE

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