D. rerio Gene: MPP4 (1 to many) - ENSDARG00000076872 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000076872
NameMPP4 (1 to many)
Descriptionsi:ch73-272h16.4 [Source:ZFIN;Acc:ZDB-GENE-120214-43]
OrganismDanio rerio (zebrafish)
Synonym(s)dlg6
Orthologs(s)16 orthologs
Paralog(s)8 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
610
  • 610
97.96
  • 97.96
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.72e3
  • 4.72e3
  • 1.48e4
84.20
  • 84.20
  • 50.28
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
5.12e3
  • 5.12e3
  • 1.51e4
  • 2.06e4
  • 2.13e4
  • 2.77e4
82.87
  • 82.87
  • 49.50
  • 30.88
  • 28.76
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
8.39e3
  • 8.39e3
  • 2.36e4
71.89
  • 71.89
  • 20.98
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.28
  • 56.28
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.12
  • 55.12
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.17
  • 53.17
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.48
  • 49.48
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.56e4
  • 1.56e4
47.69
  • 47.69
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.29
  • 47.29
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.62e4
  • 1.62e4
45.88
  • 45.88
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.27
  • 45.27
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.73e4
  • 1.73e4
42.00
  • 42.00
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.71
  • 39.71
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.31e4
  • 2.31e4
22.72
  • 22.72
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression
Opisthokonta8 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000076872.

Cross-references

EnsemblENSDARG00000076872 (MPP4 (1 to many))
HGNCHGNC:13680 (MPP4 (1 to many))
ZFINZDB-GENE-120214-43 (si:ch73-272h16.4)
EMBLCU570787
Uniprot/SPTREMBLE7FC45, E7FC45_DANRE, F1R1G2, F1R1G2_DANRE, I3IRY5, I3IRY5_DANRE, I3IRZ5, I3IRZ5_DANRE

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