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D. rerio Gene: cbln2b - ENSDARG00000077151 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000077151
Namecbln2b
Descriptioncerebellin 2b precursor [Source:ZFIN;Acc:ZDB-GENE-070615-12]
OrganismDanio rerio (zebrafish)
Synonym(s)cbln2.2, sghc1q03, zgc:163051
Orthologs(s)16 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.58e3
  • 1.58e3
94.71
  • 94.71
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.05e3
  • 2.05e3
  • 8.99e3
93.13
  • 93.13
  • 69.91
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
3.61e3
  • 3.61e3
  • 7.32e3
  • 1.34e4
  • 1.61e4
  • 1.68e4
87.90
  • 87.90
  • 75.49
  • 55.23
  • 46.00
  • 43.91
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
5.73e3
  • 5.73e3
  • 1.45e4
80.82
  • 80.82
  • 51.56
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
9.40e3
  • 9.40e3
68.52
  • 68.52
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.25
  • 59.25
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.66e4
  • 1.66e4
44.38
  • 44.38
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.90e4
  • 1.90e4
36.37
  • 36.37
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.60
  • 29.60
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression
Chordata5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000077151.

Cross-references

EnsemblENSDARG00000077151 (cbln2b)
ZFINZDB-GENE-070615-12 (cbln2b)
EMBLBC142604, CU929414
Uniprot/SPTREMBLA5PKT3, A5PKT3_DANRE

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