D. rerio Gene: LRRC61 - ENSDARG00000077357 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000077357
NameLRRC61
Descriptionsi:dkey-200j6.2 [Source:ZFIN;Acc:ZDB-GENE-110913-65]
OrganismDanio rerio (zebrafish)
Synonym(s)flj31392, hspc295, mgc3036, zgc:136338
Orthologs(s)11 orthologs
Paralog(s)439 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.38e3
  • 6.38e3
78.63
  • 78.63
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
6.96e3
  • 6.96e3
  • 9.53e3
  • 9.68e3
  • 1.05e4
  • 1.50e4
76.71
  • 76.71
  • 68.10
  • 67.59
  • 64.74
  • 49.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.43e3
  • 7.43e3
75.12
  • 75.12
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.57e3
  • 7.57e3
74.65
  • 74.65
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.88e3
  • 8.88e3
70.27
  • 70.27
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
8.92e3
  • 8.92e3
  • 1.50e4
  • 1.52e4
  • 1.79e4
  • 1.81e4
  • 1.83e4
  • 1.83e4
70.13
  • 70.13
  • 49.81
  • 49.05
  • 40.18
  • 39.42
  • 38.62
  • 38.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.05e3
  • 9.05e3
69.69
  • 69.69
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
9.36e3
  • 9.36e3
  • 1.14e4
  • 1.46e4
  • 1.50e4
68.66
  • 68.66
  • 61.81
  • 51.10
  • 49.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.81e3
  • 9.81e3
67.16
  • 67.16
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.54
  • 62.54
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.21e4
  • 1.21e4
  • 1.78e4
59.64
  • 59.64
  • 40.43
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.86
  • 56.86
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.07
  • 55.07
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.65
  • 54.65
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.46
  • 53.46
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
  • 1.65e4
52.39
  • 52.39
  • 44.67
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
1.44e4
  • 1.44e4
  • 1.47e4
51.71
  • 51.71
  • 50.85
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.47e4
  • 1.47e4
  • 1.49e4
  • 1.56e4
  • 1.56e4
  • 2.00e4
50.72
  • 50.72
  • 49.95
  • 47.65
  • 47.61
  • 33.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.70
  • 48.70
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.21
  • 45.21
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
44.93
  • 44.93
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.72e4
  • 1.72e4
  • 1.77e4
  • 1.83e4
42.32
  • 42.32
  • 40.59
  • 38.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.86
  • 39.86
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.36
  • 33.36
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.78
  • 28.78
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota439 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000077357.

Cross-references

EnsemblENSDARG00000077357 (LRRC61)
HGNCHGNC:21704 (LRRC61)
ZFINZDB-GENE-060616-245 (lrrc61), ZDB-GENE-110913-65 (si:dkey-200j6.2)
EMBLCR381664
Uniprot/SPTREMBLF1QDN3, F1QDN3_DANRE

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