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D. rerio Gene: si:rp71-68n21.12 - ENSDARG00000077382 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000077382
Namesi:rp71-68n21.12
Descriptionsi:rp71-68n21.12 [Source:ZFIN;Acc:ZDB-GENE-081105-169]
OrganismDanio rerio (zebrafish)
Paralog(s)7 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.05e4
  • 1.05e4
  • 1.38e4
64.72
  • 64.72
  • 53.71
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.58e4
  • 1.58e4
47.03
  • 47.03
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.73e4
  • 1.73e4
41.93
  • 41.93
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.52
  • 39.52
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
  • 2.11e4
38.35
  • 38.35
  • 29.27
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.85e4
  • 1.85e4
  • 2.03e4
  • 2.21e4
  • 2.25e4
37.89
  • 37.89
  • 32.06
  • 26.10
  • 24.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.05e4
  • 2.05e4
  • 2.18e4
31.20
  • 31.20
  • 26.88
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
30.97
  • 30.97
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
29.96
  • 29.96
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.35e4
  • 2.35e4
21.42
  • 21.42
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota7 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000077382.

Cross-references

EnsemblENSDARG00000077382 (si:rp71-68n21.12)
ZFINZDB-GENE-081105-169 (si:rp71-68n21.12)
EMBLBX511129
Uniprot/SPTREMBLE7F7H6, E7F7H6_DANRE, F1QZP7, F1QZP7_DANRE

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