Gene: arsia - ENSDARG00000077606 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000077606
Name	arsia
Description	arylsulfatase family, member Ia [Source:ZFIN;Acc:ZDB-GENE-140106-141]
Organism	Danio rerio (zebrafish)
Synonym(s)	zmp:0000001181
Orthologs(s)	17 orthologs
Paralog(s)	4 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.80e4 1.80e4	39.68 39.68	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000033Hatching:Long-pec UBERON:0000068embryo stage ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage ZFS:0000037Larval:Day 5	1.85e4 1.85e4 2.09e4 2.11e4 2.12e4 2.23e4	37.96 37.96 29.89 29.38 29.17 25.33	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000033	head	[+] 1 stage ZFS:0000037Larval:Day 5	1.88e4 1.88e4	37.13 37.13	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.93e4 1.93e4	35.34 35.34	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.97e4 1.97e4 2.07e4	34.12 34.12 30.56	AEIR AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	2.08e4 2.08e4	30.20 30.20	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.55e4 2.55e4	14.59 14.59	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	17 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	17 genes ENSG00000183876 ARSI ENSMUSG00000036412 Arsi ENSPTRG00000017415 ARSI ENSGGOG00000000111 ARSI ENSMMUG00000011565 ARSI ENSRNOG00000026060 Arsi ENSBTAG00000012834 ARSI ENSSSCG00000014448 ENSECAG00000004586 ARSI ENSOCUG00000025005 ARSI ENSCAFG00000018123 ARSI ENSFCAG00000024271 ARSI ENSCPOG00000021634 ARSI ENSEEUG00000003013 ARSI ENSGALG00000005616 ARSI ENSACAG00000015011 ARSI ENSXETG00000011881 arsi	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000077606.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	2 genes ENSDARG00000063359 ARSI (1 to many) ENSDARG00000077590 ARSJ	Compare expression	[+]
Eumetazoa	3 genes ENSDARG00000063359 ARSI (1 to many) ENSDARG00000076843 si:dkey-174i8.1 ENSDARG00000077590 ARSJ	Compare expression	[+]
Eukaryota	4 genes ENSDARG00000051853 galns ENSDARG00000063359 ARSI (1 to many) ENSDARG00000076843 si:dkey-174i8.1 ENSDARG00000077590 ARSJ	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000077606.

Cross-references

Ensembl	ENSDARG00000077606 (arsia)
ZFIN	ZDB-GENE-140106-141 (arsia)
EMBL	CU462913
Uniprot/SPTREMBL	E7F4Z7, E7F4Z7_DANRE